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ragflow/rag/advanced_rag/knowlege_compile/dataset_nav.py

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Python

#
# Copyright 2026 The InfiniFlow Authors. All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
#
"""Incremental clustering for dataset-level navigation.
Replaces the old 128-doc markdown with a hierarchy of nav_cluster and nav_doc
ES rows. Each new document is embedded and placed into the nearest cluster
via layered KNN search + threshold-based merge/create.
Storage: one ES/Infinity row per nav_cluster or nav_doc node.
Tree structure encoded via ``parent_kwd`` on each row — no full-tree JSON blob.
"""
from __future__ import annotations
import asyncio
import json
import logging
import re
from typing import Any
import xxhash
from common.misc_utils import thread_pool_exec
from rag.utils.redis_conn import RedisDistributedLock
from ._common import encode as _encode
from ._common import knowledge_compile_gen_conf as _knowledge_compile_gen_conf
# ---------------------------------------------------------------------------
# Constants
# ---------------------------------------------------------------------------
_COMPILE_KWD = "dataset_nav"
# Embedding dimension — inferred at runtime from the first encode() call.
# None until _embed_dim is set.
_EMBED_DIM: int | None = None
# Similarity thresholds
_MERGE_THRESHOLD = 0.80 # merge doc into cluster
_RECURSE_THRESHOLD = 0.65 # continue descending into children
_MIN_SIM = 0.50 # minimum similarity to be considered related
# Max child count before triggering rebalance
_MAX_FANOUT = 64
# Max docs per leaf cluster before triggering split
_MAX_DOCS_PER_CLUSTER = 50
# Concurrency lock TTL
_LOCK_TIMEOUT_S = 30
_LOCK_BLOCKING_TIMEOUT_S = 5
# Hard limit on how many sibling clusters we evaluate per KNN call
_KNN_TOP_K = 5
# ---------------------------------------------------------------------------
# Helpers
# ---------------------------------------------------------------------------
def _nav_doc_id(doc_id: str) -> str:
"""Stable row id for a nav_doc (deterministic by doc_id)."""
return xxhash.xxh64(
f"dataset_nav:doc:{doc_id}".encode("utf-8", "surrogatepass"),
).hexdigest()
def _nav_cluster_id(kb_id: str, name: str) -> str:
"""Stable row id for a nav_cluster (deterministic by kb_id + name)."""
return xxhash.xxh64(
f"dataset_nav:{kb_id}:cluster:{name}".encode("utf-8", "surrogatepass"),
).hexdigest()
def _nav_lock_key(kb_id: str) -> str:
"""Redis lock key for concurrency control on a KB's nav tree."""
return f"dataset_nav:{kb_id}"
def _extract_root_summary_from_tree(tree: dict | None) -> str:
"""Extract the doc-level summary from a RAPTOR tree (or bare string)."""
if not isinstance(tree, dict):
return ""
title = tree.get("title") or ""
if isinstance(title, str) and title.strip():
return title.strip()
for alt in ("summary", "content_with_weight", "content"):
v = tree.get(alt)
if isinstance(v, str) and v.strip():
return v.strip()
return ""
def _index_name(tenant_id: str) -> str:
from rag.nlp import search as _rag_search
return _rag_search.index_name(tenant_id)
def _vec_field(dim: int) -> str:
return f"q_{dim}_vec"
# ---------------------------------------------------------------------------
# Doc store I/O — works with any engine (ES, Infinity, …) via docStoreConn
# ---------------------------------------------------------------------------
async def _store_get(tenant_id: str, kb_id: str, row_id: str) -> dict | None:
from common import settings
index = _index_name(tenant_id)
try:
return (
await thread_pool_exec(
settings.docStoreConn.get,
row_id,
index,
[kb_id],
)
or None
)
except Exception:
return None
async def _store_search(
tenant_id: str,
kb_id: str,
condition: dict,
fields: list[str],
limit: int = 10000,
) -> list[dict]:
from common import settings
from common.doc_store.doc_store_base import OrderByExpr
index = _index_name(tenant_id)
res = await thread_pool_exec(
settings.docStoreConn.search,
fields,
[],
condition,
[],
OrderByExpr(),
0,
limit,
index,
[kb_id],
)
rows = settings.docStoreConn.get_fields(res, fields) if res else {}
return list(rows.values())
async def _store_knn(
tenant_id: str,
kb_id: str,
vec: list[float],
vec_dim: int,
filter_condition: dict,
top_k: int = _KNN_TOP_K,
) -> list[dict]:
"""KNN search with dense vector and filter, returning top_k hits."""
from common import settings
from common.doc_store.doc_store_base import MatchDenseExpr, OrderByExpr
index = _index_name(tenant_id)
vf = _vec_field(vec_dim)
fields = [
"content_with_weight",
"name",
"doc_id",
"compile_kwd",
"type_kwd",
"parent_kwd",
"depth_int",
"doc_count_int",
"doc_ids_kwd",
vf,
]
match_expr = MatchDenseExpr(
vector_column_name=vf,
embedding_data=list(vec),
embedding_data_type="float",
distance_type="cosine",
topn=top_k,
extra_options={},
)
res = await thread_pool_exec(
settings.docStoreConn.search,
fields,
[],
filter_condition,
[match_expr],
OrderByExpr(),
0,
top_k,
index,
[kb_id],
)
results = settings.docStoreConn.get_fields(res, fields) if res else {}
rows = list(results.values())
if filter_condition and any(not _matches_condition(row, filter_condition) for row in rows):
scanned = await _store_search(tenant_id, kb_id, filter_condition, fields, limit=10000)
rows = [row for row in scanned if _vector_len(row.get(vf)) == vec_dim and _matches_condition(row, filter_condition)]
rows.sort(key=lambda row: _cosine_sim(vec, row.get(vf)), reverse=True)
rows = rows[:top_k]
return rows
async def _store_upsert(tenant_id: str, kb_id: str, doc: dict) -> None:
from common import settings
index = _index_name(tenant_id)
row_id = doc.get("id", "")
existing = await thread_pool_exec(
settings.docStoreConn.get,
row_id,
index,
[kb_id],
)
if existing:
upd = {k: v for k, v in doc.items() if k != "id"}
await thread_pool_exec(
settings.docStoreConn.update,
{"id": row_id},
upd,
index,
kb_id,
)
else:
await thread_pool_exec(
settings.docStoreConn.insert,
[doc],
index,
kb_id,
)
async def _store_delete(tenant_id: str, kb_id: str, row_id: str) -> None:
from common import settings
index = _index_name(tenant_id)
try:
await thread_pool_exec(
settings.docStoreConn.delete,
{"id": [row_id]},
index,
kb_id,
)
except Exception:
pass
# ---------------------------------------------------------------------------
# Embedding helpers
# ---------------------------------------------------------------------------
async def _embed(embd_mdl, text: str) -> list[float]:
"""Encode a single text string and return its embedding vector."""
global _EMBED_DIM
vecs = await _encode(embd_mdl, [text])
if vecs and _vector_len(vecs[0]) > 0:
dim = len(vecs[0])
if _EMBED_DIM is None:
_EMBED_DIM = dim
return vecs[0]
return []
def _vector_len(vec) -> int:
if vec is None:
return 0
try:
return len(vec)
except TypeError:
return 0
def _cosine_sim(a, b) -> float:
"""Compute cosine similarity between two vectors."""
a_len = _vector_len(a)
b_len = _vector_len(b)
if a_len == 0 or b_len == 0 or a_len != b_len:
return 0.0
dot = sum(x * y for x, y in zip(a, b))
na = sum(x * x for x in a) ** 0.5
nb = sum(x * x for x in b) ** 0.5
if na == 0 or nb == 0:
return 0.0
return dot / (na * nb)
# ---------------------------------------------------------------------------
# Fabrication of nav rows
# ---------------------------------------------------------------------------
def _make_nav_doc_row(
kb_id: str,
doc_id: str,
summary: str,
parent_kwd: str,
depth_int: int,
embd_mdl=None,
embedding: list[float] | None = None,
) -> dict:
"""Build a nav_doc ES/Infinity row dict for a single document leaf node."""
row: dict = {
"id": _nav_doc_id(doc_id),
"kb_id": kb_id,
"doc_id": doc_id,
"compile_kwd": _COMPILE_KWD,
"knowledge_graph_kwd": "entity",
"type_kwd": "nav_doc",
"name": f"{parent_kwd}_{xxhash.xxh64(summary.encode()).hexdigest()[:12]}",
"parent_kwd": parent_kwd,
"depth_int": depth_int,
"available_int": 0,
}
payload = {"type": "nav_doc", "description": summary}
row["content_with_weight"] = json.dumps(payload, ensure_ascii=False)
ltks = _tokenize(summary)
row["content_ltks"] = ltks
row["content_sm_ltks"] = _fine_tokenize(ltks)
if _vector_len(embedding) > 0:
dim = len(embedding)
row[_vec_field(dim)] = embedding
return row
def _make_nav_cluster_row(
kb_id: str,
name: str,
description: str,
parent_kwd: str,
depth_int: int,
doc_ids: list[str],
embedding: list[float] | None = None,
) -> dict:
"""Build a nav_cluster ES/Infinity row dict for an internal tree node."""
cluster_id = _nav_cluster_id(kb_id, name)
row: dict = {
"id": cluster_id,
"kb_id": kb_id,
"doc_id": kb_id,
"compile_kwd": _COMPILE_KWD,
"knowledge_graph_kwd": "entity",
"type_kwd": "nav_cluster",
"name": name,
"parent_kwd": parent_kwd,
"depth_int": depth_int,
"doc_ids_kwd": doc_ids,
"doc_count_int": len(doc_ids),
"available_int": 0,
}
payload = {"type": "nav_cluster", "description": description}
row["content_with_weight"] = json.dumps(payload, ensure_ascii=False)
ltks = _tokenize(description)
row["content_ltks"] = ltks
row["content_sm_ltks"] = _fine_tokenize(ltks)
if _vector_len(embedding) > 0:
dim = len(embedding)
row[_vec_field(dim)] = embedding
return row
def _tokenize(text: str) -> str:
"""Coarse-grained tokenization for ES/Infinity full-text search."""
from rag.nlp import rag_tokenizer
return rag_tokenizer.tokenize(text)
def _fine_tokenize(text: str) -> str:
"""Fine-grained tokenization for ES/Infinity sub-word search."""
from rag.nlp import rag_tokenizer
return rag_tokenizer.fine_grained_tokenize(text)
def _matches_condition(row: dict, condition: dict) -> bool:
"""Check the simple equality filters used by dataset navigation."""
for field, expected in condition.items():
if not expected or field == "kb_id":
continue
actual = row.get(field)
actual_values = actual if isinstance(actual, (list, tuple, set)) else [actual]
expected_values = expected if isinstance(expected, (list, tuple, set)) else [expected]
if not any(str(value) == str(item) for value in actual_values for item in expected_values):
return False
return True
# ---------------------------------------------------------------------------
# Incremental clustering core
# ---------------------------------------------------------------------------
async def _find_best_cluster(
tenant_id: str,
kb_id: str,
doc_embedding: list[float],
vec_dim: int,
) -> tuple[str | None, str | None, float]:
"""Locate the nearest cluster for a document via layered KNN descent.
Starts from the root cluster (depth_int=0) and recursively descends into
the best-matching child as long as similarity stays above
``_RECURSE_THRESHOLD``. Returns the deepest cluster whose children are
all less similar, along with the similarity score.
Returns:
(best_cluster_name, best_cluster_parent_name, similarity)
"""
# Step 1: find the root cluster (depth_int=0)
root_cond = {
"kb_id": [kb_id],
"compile_kwd": [_COMPILE_KWD],
"type_kwd": ["nav_cluster"],
"depth_int": [0],
}
roots = await _store_knn(tenant_id, kb_id, doc_embedding, vec_dim, root_cond, top_k=1)
if not roots:
return None, None, 0.0
best = roots[0]
best_name = best.get("name", "")
best_parent = best.get("parent_kwd", "")
# compute actual similarity to root
stored = best.get(_vec_field(vec_dim))
sim = _cosine_sim(doc_embedding, stored)
visited_names = {best_name}
# Step 2: recursively descend into children
while sim >= _RECURSE_THRESHOLD:
child_cond = {
"kb_id": [kb_id],
"compile_kwd": [_COMPILE_KWD],
"type_kwd": ["nav_cluster"],
"parent_kwd": [best_name],
}
children = await _store_knn(tenant_id, kb_id, doc_embedding, vec_dim, child_cond, top_k=1)
if not children:
break
child = children[0]
child_name = child.get("name", "")
if not child_name or child_name in visited_names:
break
stored = child.get(_vec_field(vec_dim))
child_sim = _cosine_sim(doc_embedding, stored)
if child_sim < _RECURSE_THRESHOLD:
break
best_name = child_name
best_parent = best.get("parent_kwd", best_parent)
sim = child_sim
best = child
visited_names.add(best_name)
return best_name, best_parent, sim
async def _llm_merge(chat_mdl, cluster_desc: str, doc_summary: str) -> str:
"""LLM merge: fuse existing cluster description with new doc summary."""
if not chat_mdl:
return cluster_desc # no LLM available, keep old summary
from rag.prompts.generator import gen_json
prompt = (
"Merge the following two descriptions of the same topic into "
"a single concise summary (1-3 sentences):\n\n"
f"Existing: {cluster_desc}\n\n"
f"New: {doc_summary}\n\n"
"Return ONLY the merged text, no commentary."
)
try:
resp = await gen_json("", prompt, chat_mdl, gen_conf=_knowledge_compile_gen_conf(chat_mdl, {"temperature": 0.1}))
if isinstance(resp, dict):
return str(resp.get("merged", resp.get("result", cluster_desc)))
if isinstance(resp, str) and resp.strip():
return resp.strip()
except Exception:
logging.exception("dataset_nav: LLM merge failed, keeping original")
return cluster_desc
def _clean_title(title: str) -> str:
"""Normalize an LLM title into a one-line, length-capped display name."""
return " ".join((title or "").split())[:48].strip()
def _fallback_title(summary: str) -> str:
"""Derive a short readable title from a summary when the LLM gives none."""
words = " ".join((summary or "").split()).split(" ")
return " ".join(words[:6]).strip() or "Cluster"
def _readable_cluster_name(title: str, seed: str) -> str:
"""A readable yet unique nav-cluster key: ``"<title> <8-hex>"``.
The title makes the node name human-readable; the short hash of ``seed``
(the cluster description) preserves the per-KB uniqueness the tree keying
relies on (``_nav_cluster_id`` / ``parent_kwd``).
"""
suffix = xxhash.xxh64((seed or "").encode("utf-8")).hexdigest()[:8]
return f"{_clean_title(title) or 'Cluster'} {suffix}"
async def _llm_create_summary(chat_mdl, doc_summaries: list[str]) -> tuple[str, str]:
"""LLM-derive a cluster's readable ``(name, summary)`` from doc summaries.
``name`` is a short human-readable topic title used to make the nav node
name readable (the caller still appends a short hash to keep the tree key
unique); ``summary`` is the 1-3 sentence description.
"""
fallback_summary = doc_summaries[0] if doc_summaries else ""
if not chat_mdl:
return _fallback_title(fallback_summary), fallback_summary
from rag.prompts.generator import gen_json
texts = "\n---\n".join(doc_summaries)
prompt = (
"Given the document excerpts below, produce a short human-readable topic "
"name and a concise description of their common topic.\n\n"
f"{texts}\n\n"
'Return ONLY JSON: {"name": "<2-6 word topic title>", "summary": "<1-3 sentence description>"}'
)
try:
resp = await gen_json("", prompt, chat_mdl, gen_conf=_knowledge_compile_gen_conf(chat_mdl, {"temperature": 0.1}))
if isinstance(resp, dict):
summary = str(resp.get("summary") or resp.get("result") or fallback_summary).strip()
name = _clean_title(str(resp.get("name") or "")) or _fallback_title(summary)
return name, (summary or fallback_summary)
if isinstance(resp, str) and resp.strip():
return _fallback_title(resp), resp.strip()
except Exception:
logging.exception("dataset_nav: LLM summary failed")
return _fallback_title(fallback_summary), fallback_summary
# ---------------------------------------------------------------------------
# Public surface
# ---------------------------------------------------------------------------
async def upsert_dataset_nav_doc(
tenant_id: str,
kb_id: str,
doc_id: str,
summary_or_tree: Any,
embd_mdl=None,
chat_mdl=None,
) -> None:
"""Upsert a document into the nav clustering tree.
Args:
tenant_id: Tenant owning the KB.
kb_id: Knowledge base id.
doc_id: Document id.
summary_or_tree: A plain summary string, or a RAPTOR tree dict from
which the root summary is extracted.
embd_mdl: LLMBundle for embedding (required for clustering).
chat_mdl: LLMBundle for chat (required for LLM merge/summary).
"""
if not doc_id or not kb_id:
return
# 1. Extract summary
if isinstance(summary_or_tree, dict):
summary = _extract_root_summary_from_tree(summary_or_tree)
elif isinstance(summary_or_tree, str):
summary = summary_or_tree
else:
summary = ""
if not summary:
logging.info("dataset_nav: skipping doc=%s (kb=%s) — no summary", doc_id, kb_id)
return
# 2. Embed doc summary before taking the KB lock. The result is
# independent of the nav tree; all tree reads, deletes, and writes below
# are serialized by the same lock.
doc_embedding = await _embed(embd_mdl, summary) if embd_mdl else []
vec_dim = len(doc_embedding)
lock = RedisDistributedLock(
_nav_lock_key(kb_id),
timeout=_LOCK_TIMEOUT_S,
blocking_timeout=_LOCK_BLOCKING_TIMEOUT_S,
)
try:
await lock.spin_acquire()
except Exception:
logging.exception("dataset_nav: lock acquire failed for kb=%s", kb_id)
return
try:
# 3. Check and replace the existing nav_doc while holding the same
# lock as placement. Otherwise concurrent updates can both observe
# the old row and race while deleting/rebuilding its parent cluster.
existing_doc = await _store_get(tenant_id, kb_id, _nav_doc_id(doc_id))
if existing_doc:
old_payload = json.loads(existing_doc.get("content_with_weight") or "{}")
if old_payload.get("description") == summary:
return
await _remove_dataset_nav_doc_locked(tenant_id, kb_id, doc_id)
# 4. Layered KNN search for nearest cluster
if _vector_len(doc_embedding) > 0:
best_name, best_parent, sim = await _find_best_cluster(
tenant_id,
kb_id,
doc_embedding,
vec_dim,
)
else:
logging.warning("dataset_nav: embedding unavailable for doc=%s, skipping KNN placement", doc_id)
best_name, best_parent, sim = None, None, 0.0
if best_name and sim >= _MERGE_THRESHOLD:
# ── Merge into best cluster ──
cluster_id = _nav_cluster_id(kb_id, best_name)
cluster_row = await _store_get(tenant_id, kb_id, cluster_id)
if cluster_row:
payload = json.loads(cluster_row.get("content_with_weight") or "{}")
old_desc = payload.get("description", "")
new_desc = await _llm_merge(chat_mdl, old_desc, summary)
payload["description"] = new_desc
cluster_row["content_with_weight"] = json.dumps(payload, ensure_ascii=False)
doc_ids = cluster_row.get("doc_ids_kwd") or []
if doc_id not in doc_ids:
doc_ids.append(doc_id)
cluster_row["doc_ids_kwd"] = doc_ids
cluster_row["doc_count_int"] = len(doc_ids)
# Re-compute embedding for the new summary
if embd_mdl and new_desc != old_desc:
new_emb = await _embed(embd_mdl, new_desc)
if _vector_len(new_emb) > 0:
cluster_row[_vec_field(len(new_emb))] = new_emb
await _store_upsert(tenant_id, kb_id, cluster_row)
# Upsert nav_doc under the cluster
depth = cluster_row.get("depth_int", 1) + 1 if cluster_row else 2
nav_doc_row = _make_nav_doc_row(
kb_id,
doc_id,
summary,
best_name,
depth,
embd_mdl,
doc_embedding,
)
await _store_upsert(tenant_id, kb_id, nav_doc_row)
# Check fanout — if the cluster now has too many children, trigger split
await _maybe_split_cluster(
tenant_id,
kb_id,
best_name,
embd_mdl,
chat_mdl,
)
elif best_name and sim >= _MIN_SIM:
# ── Create new cluster as sibling/child ──
parent_for_new = best_parent if best_parent else best_name
depth_of_parent = 1 # default
parent_row = await _store_get(
tenant_id,
kb_id,
_nav_cluster_id(kb_id, parent_for_new),
)
if parent_row:
depth_of_parent = parent_row.get("depth_int", 1)
new_depth = depth_of_parent + 1
new_title, new_desc = await _llm_create_summary(chat_mdl, [summary])
new_name = _readable_cluster_name(new_title, summary)
new_cluster = _make_nav_cluster_row(
kb_id,
new_name,
new_desc,
parent_for_new,
depth_of_parent,
[doc_id],
doc_embedding,
)
if embd_mdl and _vector_len(doc_embedding) > 0:
new_cluster[_vec_field(len(doc_embedding))] = doc_embedding
await _store_upsert(tenant_id, kb_id, new_cluster)
nav_doc_row = _make_nav_doc_row(
kb_id,
doc_id,
summary,
new_name,
new_depth,
embd_mdl,
doc_embedding,
)
await _store_upsert(tenant_id, kb_id, nav_doc_row)
else:
# ── Create root-level new cluster ──
root_title, new_desc = await _llm_create_summary(chat_mdl, [summary])
new_name = _readable_cluster_name(root_title, summary)
new_cluster = _make_nav_cluster_row(
kb_id,
new_name,
new_desc,
"root",
0,
[doc_id],
doc_embedding,
)
if embd_mdl and _vector_len(doc_embedding) > 0:
new_cluster[_vec_field(len(doc_embedding))] = doc_embedding
await _store_upsert(tenant_id, kb_id, new_cluster)
nav_doc_row = _make_nav_doc_row(
kb_id,
doc_id,
summary,
new_name,
1,
embd_mdl,
doc_embedding,
)
await _store_upsert(tenant_id, kb_id, nav_doc_row)
except Exception:
logging.exception(
"dataset_nav: upsert failed for kb=%s doc=%s",
kb_id,
doc_id,
)
finally:
try:
lock.release()
except Exception:
logging.exception("dataset_nav: lock release failed for kb=%s", kb_id)
async def _remove_dataset_nav_doc_locked(
tenant_id: str,
kb_id: str,
doc_id: str,
) -> None:
"""Remove a document nav row; the caller must hold the KB nav lock."""
# 1. Find and delete the nav_doc row
doc_row_id = _nav_doc_id(doc_id)
doc_row = await _store_get(tenant_id, kb_id, doc_row_id)
if not doc_row:
return
parent_name = doc_row.get("parent_kwd", "")
await _store_delete(tenant_id, kb_id, doc_row_id)
# 2. Remove doc_id from the parent cluster's doc_ids_kwd
if parent_name and parent_name != "root":
cluster_id = _nav_cluster_id(kb_id, parent_name)
cluster_row = await _store_get(tenant_id, kb_id, cluster_id)
if cluster_row:
doc_ids = cluster_row.get("doc_ids_kwd") or []
if doc_id in doc_ids:
doc_ids.remove(doc_id)
if not doc_ids:
# Cluster is empty — delete it
await _store_delete(tenant_id, kb_id, cluster_id)
# Recurse: check grandparent
grandparent = cluster_row.get("parent_kwd", "")
if grandparent and grandparent != "root":
await _cleanup_empty_cluster(
tenant_id,
kb_id,
grandparent,
)
else:
cluster_row["doc_ids_kwd"] = doc_ids
cluster_row["doc_count_int"] = len(doc_ids)
await _store_upsert(tenant_id, kb_id, cluster_row)
async def remove_dataset_nav_doc(
tenant_id: str,
kb_id: str,
doc_id: str,
) -> None:
"""Remove a document from the nav clustering tree.
Cascades: if the parent cluster becomes empty after removal, the cluster
itself is also removed.
"""
if not doc_id or not kb_id:
return
lock = RedisDistributedLock(
_nav_lock_key(kb_id),
timeout=_LOCK_TIMEOUT_S,
blocking_timeout=_LOCK_BLOCKING_TIMEOUT_S,
)
try:
await lock.spin_acquire()
except Exception:
logging.exception("dataset_nav: lock acquire failed for kb=%s", kb_id)
return
try:
await _remove_dataset_nav_doc_locked(tenant_id, kb_id, doc_id)
except Exception:
logging.exception(
"dataset_nav: remove failed for kb=%s doc=%s",
kb_id,
doc_id,
)
finally:
try:
lock.release()
except Exception:
logging.exception("dataset_nav: lock release failed for kb=%s", kb_id)
async def _cleanup_empty_cluster(
tenant_id: str,
kb_id: str,
cluster_name: str,
) -> None:
"""Recursively remove a cluster if it has no doc children and no direct doc descendants."""
cluster_id = _nav_cluster_id(kb_id, cluster_name)
cluster = await _store_get(tenant_id, kb_id, cluster_id)
if not cluster:
return
# Check direct children (nav_cluster)
from common import settings
from common.doc_store.doc_store_base import OrderByExpr
index = _index_name(tenant_id)
child_cond = {
"kb_id": [kb_id],
"compile_kwd": [_COMPILE_KWD],
"parent_kwd": [cluster_name],
}
res = await thread_pool_exec(
settings.docStoreConn.search,
["id"],
[],
child_cond,
[],
OrderByExpr(),
0,
100,
index,
[kb_id],
)
children = settings.docStoreConn.get_fields(res, ["id"]) if res else {}
if not children and not cluster.get("doc_ids_kwd"):
grandparent = cluster.get("parent_kwd", "")
await _store_delete(tenant_id, kb_id, cluster_id)
if grandparent and grandparent != "root":
await _cleanup_empty_cluster(tenant_id, kb_id, grandparent)
async def _maybe_split_cluster(
tenant_id: str,
kb_id: str,
cluster_name: str,
embd_mdl,
chat_mdl,
) -> None:
"""If a cluster exceeds fanout or doc count, split children via AHC."""
from common import settings
from common.doc_store.doc_store_base import OrderByExpr
index = _index_name(tenant_id)
# Count children (nav_cluster)
child_cond = {
"kb_id": [kb_id],
"compile_kwd": [_COMPILE_KWD],
"parent_kwd": [cluster_name],
}
res = await thread_pool_exec(
settings.docStoreConn.search,
["id", "name", "type_kwd"],
[],
child_cond,
[],
OrderByExpr(),
0,
200,
index,
[kb_id],
)
children = settings.docStoreConn.get_fields(res, ["id", "name", "type_kwd"]) if res else {}
if not children:
return
nav_cluster_kids = [c for c in children.values() if c.get("type_kwd") == "nav_cluster"]
nav_doc_kids = [c for c in children.values() if c.get("type_kwd") == "nav_doc"]
should_split = len(nav_cluster_kids) + len(nav_doc_kids) > _MAX_FANOUT or len(nav_doc_kids) > _MAX_DOCS_PER_CLUSTER
if not should_split:
return
# Load embeddings for all children
vf = _vec_field(_EMBED_DIM) if _EMBED_DIM else "q_768_vec"
child_details = await _store_search(
tenant_id,
kb_id,
child_cond,
["id", "name", "type_kwd", "content_with_weight", vf],
limit=200,
)
embeddings = []
names = []
name_to_type: dict[str, str] = {}
for c in child_details:
stored = c.get(vf)
if stored:
embeddings.append(stored)
names.append(c.get("name", ""))
cn = c.get("name", "")
if cn:
name_to_type[cn] = c.get("type_kwd", "nav_cluster")
if len(embeddings) < 4:
return
# Simple k-means-like split into 2 groups (no scikit dependency at runtime)
# Use the first two embeddings as initial centroids
centroids = [embeddings[0][:], embeddings[len(embeddings) // 2][:]]
for _ in range(10):
groups = [[], []]
for emb in embeddings:
d0 = sum((a - b) ** 2 for a, b in zip(emb, centroids[0]))
d1 = sum((a - b) ** 2 for a, b in zip(emb, centroids[1]))
groups[0 if d0 < d1 else 1].append(emb)
for gi in (0, 1):
if groups[gi]:
avg = [sum(c) / len(groups[gi]) for c in zip(*groups[gi])]
centroids[gi] = avg
# Relabel
labels = []
for emb in embeddings:
d0 = sum((a - b) ** 2 for a, b in zip(emb, centroids[0]))
d1 = sum((a - b) ** 2 for a, b in zip(emb, centroids[1]))
labels.append(0 if d0 < d1 else 1)
# Create sub-clusters
cluster_row = await _store_get(tenant_id, kb_id, _nav_cluster_id(kb_id, cluster_name))
depth = (cluster_row.get("depth_int", 0) if cluster_row else 0) + 1
for gi in (0, 1):
kid_names = [names[i] for i in range(len(names)) if labels[i] == gi]
if not kid_names:
continue
# Collect doc_ids from all children
doc_ids: list[str] = []
descs: list[str] = []
for kn in kid_names:
is_doc = name_to_type.get(kn) == "nav_doc"
cid = _nav_doc_id(kn) if is_doc else _nav_cluster_id(kb_id, kn)
row = await _store_get(tenant_id, kb_id, cid)
if row:
payload = json.loads(row.get("content_with_weight") or "{}")
descs.append(payload.get("description", ""))
dids = row.get("doc_ids_kwd") or []
for d in dids:
if d not in doc_ids:
doc_ids.append(d)
if descs:
group_title, group_desc = await _llm_create_summary(chat_mdl, descs)
else:
group_title = group_desc = f"Group {gi + 1}"
group_name = _readable_cluster_name(group_title, group_desc)
group_emb = await _embed(embd_mdl, group_desc) if embd_mdl else []
new_cluster = _make_nav_cluster_row(
kb_id,
group_name,
group_desc,
cluster_name,
depth,
doc_ids,
group_emb,
)
await _store_upsert(tenant_id, kb_id, new_cluster)
# Reparent children to new split cluster
for kn in kid_names:
is_doc = name_to_type.get(kn) == "nav_doc"
cid = _nav_doc_id(kn) if is_doc else _nav_cluster_id(kb_id, kn)
row = await _store_get(tenant_id, kb_id, cid)
if row:
row["parent_kwd"] = group_name
row["depth_int"] = depth + 1
await _store_upsert(tenant_id, kb_id, row)
async def search_dataset_nav(
tenant_id: str,
kb_id: str,
query: str,
embd_mdl=None,
top_k: int = 8,
) -> list[dict]:
"""Find the nav-tree nodes most relevant to ``query`` for one KB.
The nav rows are ``available_int=0`` (invisible to the normal retriever), so
this is the sanctioned read seam: a caller uses the returned document ids to
route a scoped chunk retrieval. Returns items shaped as::
{"type": "nav_doc" | "nav_cluster",
"doc_id": str | None, # the document, for a leaf
"doc_ids": [str], # the documents a node covers
"name": str, "description": str, "score": float}
Ranked by vector KNN over the node summaries when ``embd_mdl`` is given;
otherwise a best-effort text-ranked scan.
"""
query = (query or "").strip()
if not query:
return []
condition = {"compile_kwd": [_COMPILE_KWD]}
rows_with_scores: list[tuple[dict, float]] = []
if embd_mdl is not None:
try:
vec = await _embed(embd_mdl, query)
except Exception:
logging.exception("search_dataset_nav: embed failed for kb=%s", kb_id)
vec = []
if _vector_len(vec) > 0:
try:
rows = await _store_knn(tenant_id, kb_id, vec, len(vec), condition, top_k=top_k)
vf = _vec_field(len(vec))
rows_with_scores = [(r, _cosine_sim(vec, r.get(vf))) for r in rows]
except Exception:
logging.exception("search_dataset_nav: knn failed for kb=%s", kb_id)
rows_with_scores = []
if not rows_with_scores:
fields = ["content_with_weight", "name", "doc_id", "type_kwd", "doc_ids_kwd", "doc_count_int"]
try:
rows = await _store_search(tenant_id, kb_id, condition, fields, limit=max(top_k * 20, 100))
except Exception:
logging.exception("search_dataset_nav: scan failed for kb=%s", kb_id)
rows = []
rows_with_scores = [(r, _nav_text_score(query, r)) for r in rows]
rows_with_scores.sort(key=lambda item: item[1], reverse=True)
# Discard zero-score rows (text match produced no relevant hits)
rows_with_scores = [(r, s) for r, s in rows_with_scores if s > 0]
out: list[dict] = []
for r, score in rows_with_scores[:top_k]:
try:
payload = json.loads(r.get("content_with_weight") or "{}")
except Exception:
payload = {}
typ = payload.get("type") or r.get("type_kwd") or ("nav_cluster" if r.get("doc_ids_kwd") else "nav_doc")
name = r.get("name") or ""
if typ == "nav_cluster":
doc_id = None
doc_ids = _as_str_list(r.get("doc_ids_kwd"))
else:
# Leaf: ``name`` == the document id (see ``_make_nav_doc_row``).
doc_id = r.get("doc_id") or name
doc_ids = [doc_id] if doc_id else []
out.append(
{
"type": typ,
"doc_id": doc_id,
"doc_ids": doc_ids,
"name": name,
"description": payload.get("description") or "",
"doc_count": int(r.get("doc_count_int") or len(doc_ids) or 0),
"score": float(score or 0.0),
}
)
return out
def _as_str_list(value) -> list[str]:
if isinstance(value, list):
return [str(v) for v in value if v]
if isinstance(value, str) and value:
return [value]
return []
def _nav_text_score(query: str, row: dict) -> float:
try:
payload = json.loads(row.get("content_with_weight") or "{}")
except Exception:
payload = {}
haystack = " ".join(
str(x or "")
for x in (
row.get("name"),
payload.get("description"),
)
).lower()
q_terms = set(re.findall(r"[\w]+", query.lower()))
if not q_terms:
return 0.0
hits = sum(1 for term in q_terms if term in haystack)
return hits / max(len(q_terms), 1)
def remove_dataset_nav_doc_sync(
tenant_id: str,
kb_id: str,
doc_id: str,
) -> None:
"""Sync wrapper around ``remove_dataset_nav_doc``."""
try:
loop = asyncio.new_event_loop()
try:
loop.run_until_complete(
remove_dataset_nav_doc(tenant_id, kb_id, doc_id),
)
finally:
loop.close()
except Exception:
logging.exception(
"dataset_nav: sync remove failed for kb=%s doc=%s",
kb_id,
doc_id,
)