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556 lines
23 KiB
Python
556 lines
23 KiB
Python
#
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# Copyright 2026 The InfiniFlow Authors. All Rights Reserved.
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#
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# Licensed under the Apache License, Version 2.0 (the "License");
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# you may not use this file except in compliance with the License.
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# You may obtain a copy of the License at
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#
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# http://www.apache.org/licenses/LICENSE-2.0
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#
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# Unless required by applicable law or agreed to in writing, software
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# distributed under the License is distributed on an "AS IS" BASIS,
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# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
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# See the License for the specific language governing permissions and
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# limitations under the License.
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#
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"""Shared structure-graph subgraph sampling.
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Both the per-document (``/datasets/<id>/documents/<doc>/structure/graph``) and
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the dataset-wide (``/datasets/<id>/artifacts/structure``) endpoints render
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per-template structure graphs. For large graphs we don't return every
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entity/relation — we fetch a representative subgraph from the raw
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``knowledge_graph_kwd`` rows (which carry ``mention_count_int`` / ``name_kwd`` /
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``from_entity_kwd`` / ``to_entity_kwd`` / ``q_<dim>_vec``) so the response — and
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the frontend render — stay bounded.
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The two endpoints differ only in *scope*: the document endpoint filters raw
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rows by ``doc_id``; the dataset endpoint queries KB-wide (dataset-merge
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templates dedup entity/relation rows across documents). That difference lives
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entirely in the ``scope`` / ``base_entity_condition`` dicts the caller passes —
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everything else is shared here.
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"""
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import json
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import logging
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import re
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from common import settings
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from common.doc_store.doc_store_base import OrderByExpr
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from common.misc_utils import thread_pool_exec
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# Below this combined (entities + relations) count for a bucket, return all rows.
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GRAPH_FULL_THRESHOLD = 1024
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# Size of the top-mention entity seed set (set A) for large buckets.
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GRAPH_TOP_ENTITIES = 256
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# Keyword search needs a small, relevant candidate set; the larger sampling
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# cap above is intended for rendering an entire large graph bucket.
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GRAPH_KEYWORD_CANDIDATES = 16
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# Upper bound on the relation / neighbor-entity expansion so a hub node can't
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# blow up the response.
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GRAPH_EXPANSION_CAP = 4096
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GRAPH_ENTITY_FIELDS = ["id", "content_with_weight", "name_kwd", "mention_count_int", "source_chunk_ids", "doc_id", "doc_ids_kwd", "source_doc_ids"]
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GRAPH_RELATION_FIELDS = ["id", "content_with_weight", "from_entity_kwd", "to_entity_kwd", "doc_id", "doc_ids_kwd", "source_doc_ids"]
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GRAPH_ALL_FIELDS = [
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"id",
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"content_with_weight",
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"name_kwd",
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"mention_count_int",
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"source_chunk_ids",
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"from_entity_kwd",
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"to_entity_kwd",
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"knowledge_graph_kwd",
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"doc_id",
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"doc_ids_kwd",
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"source_doc_ids",
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]
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async def graph_search(index_name, kb_id, select_fields, condition, order_by, limit, match_expressions=None, offset=0):
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"""One raw-row search. Returns ``(field_map, total)`` where ``total`` is the
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full match count (not the returned slice)."""
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res = await thread_pool_exec(
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settings.docStoreConn.search,
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select_fields,
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[],
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condition,
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match_expressions or [],
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order_by,
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offset,
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max(int(limit or 0), 1),
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index_name,
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[kb_id],
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)
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field_map = settings.docStoreConn.get_fields(res, select_fields) or {}
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total = settings.docStoreConn.get_total(res)
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return field_map, int(total or 0)
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def project_entity(row: dict) -> dict | None:
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"""Project a raw ``knowledge_graph_kwd="entity"`` row to the graph-node shape
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the frontend already consumes, surfacing ``mention_count_int`` as
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``mention_count``."""
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from rag.advanced_rag.knowlege_compile.structure import _struct_graph_entity
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try:
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payload = json.loads(row.get("content_with_weight") or "{}")
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except Exception:
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return None
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if not isinstance(payload, dict):
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return None
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node = _struct_graph_entity(payload, row.get("source_chunk_ids"))
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if not node:
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return None
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mc = row.get("mention_count_int")
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if isinstance(mc, list): # Infinity returns *_int scalars fine, but be defensive
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mc = mc[0] if mc else None
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try:
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if mc is not None:
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node["mention_count"] = int(mc)
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except (TypeError, ValueError):
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pass
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return node
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def project_relation(row: dict) -> dict | None:
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"""Project a raw ``knowledge_graph_kwd="relation"`` row to the edge shape.
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Prefers the payload (matching the blob projection); falls back to the
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authoritative ``*_entity_kwd`` columns."""
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from rag.advanced_rag.knowlege_compile.structure import _struct_graph_relation
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try:
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payload = json.loads(row.get("content_with_weight") or "{}")
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except Exception:
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payload = {}
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if isinstance(payload, dict):
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node = _struct_graph_relation(payload)
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if node:
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return node
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src = str(row.get("from_entity_kwd") or "").strip()
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tgt = str(row.get("to_entity_kwd") or "").strip()
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if not src or not tgt:
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return None
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typ = payload.get("type") if isinstance(payload, dict) else None
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return {"from": src, "to": tgt, "type": str(typ).strip() if typ else "related"}
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def dedup_entities(entities: list[dict]) -> list[dict]:
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"""Order-preserving dedup by (lowercased name, type)."""
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out: list[dict] = []
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seen: set[tuple[str, str]] = set()
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for e in entities:
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key = (str(e.get("name") or "").strip().lower(), str(e.get("type") or "").strip().lower())
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if not key[0] or key in seen:
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continue
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seen.add(key)
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out.append(e)
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return out
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def _entity_response_id(entity: dict) -> str:
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for field in ("id", "name", "slug"):
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value = entity.get(field)
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if isinstance(value, str) and value.strip():
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return value.strip()
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return ""
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def _endpoint_terms(value: str) -> list[str]:
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value = value.strip()
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if not value:
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return []
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return sorted({value, value.lower()})
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def normalize_relation_endpoints(entities: list[dict], relations: list[dict]) -> list[dict]:
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"""Align relation endpoints to the returned entity ids/names."""
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if not entities or not relations:
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return relations
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lookup: dict[str, str] = {}
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ambiguous: set[str] = set()
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for entity in entities:
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response_id = _entity_response_id(entity)
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if not response_id:
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continue
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for field in ("id", "name", "slug"):
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value = entity.get(field)
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if not isinstance(value, str) or not value.strip():
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continue
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key = value.strip().lower()
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if key in lookup and lookup[key] != response_id:
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ambiguous.add(key)
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continue
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lookup[key] = response_id
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for key in ambiguous:
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lookup.pop(key, None)
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normalized: list[dict] = []
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for relation in relations:
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if not isinstance(relation, dict):
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continue
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item = dict(relation)
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for field in ("from", "to"):
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value = item.get(field)
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if isinstance(value, str):
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item[field] = lookup.get(value.strip().lower(), value)
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normalized.append(item)
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return normalized
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def filter_entities_with_relations(entities: list[dict], relations: list[dict]) -> list[dict]:
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"""Keep only entities that are referenced by at least one relation."""
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if not entities or not relations:
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return []
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# Match case-insensitively: the dataset-scoped merge lowercases relation
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# endpoints while entity names keep their original case, so exact matching
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# would drop connected nodes from graph-like views.
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connected: set[str] = set()
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for relation in relations:
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if not isinstance(relation, dict):
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continue
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for endpoint_key in ("from", "to"):
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endpoint = relation.get(endpoint_key)
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if isinstance(endpoint, str):
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endpoint = endpoint.strip().lower()
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if endpoint:
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connected.add(endpoint)
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if not connected:
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return []
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filtered: list[dict] = []
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for entity in entities:
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if not isinstance(entity, dict):
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continue
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keys: set[str] = set()
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# Structure-graph nodes are name-keyed and their relations reference
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# names; artifact-graph nodes are slug-keyed and their relations
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# reference slugs. Check all three identity fields so the same filter
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# serves both callers.
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for field in ("id", "name", "slug"):
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value = entity.get(field)
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if isinstance(value, str):
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value = value.strip().lower()
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if value:
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keys.add(value)
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if keys & connected:
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filtered.append(entity)
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return filtered
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def _row_has_enabled_source(row: dict, excluded_doc_ids: set[str]) -> bool:
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if not excluded_doc_ids:
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return True
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def _flatten_ids(value) -> set[str]:
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if value is None:
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return set()
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if isinstance(value, str):
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raw = value.strip()
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if not raw:
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return set()
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try:
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return _flatten_ids(json.loads(raw))
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except (json.JSONDecodeError, TypeError):
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return {raw}
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if isinstance(value, (list, tuple, set)):
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result: set[str] = set()
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for item in value:
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result.update(_flatten_ids(item))
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return result
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return {str(value)}
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source_ids: set[str] = set()
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for field in ("doc_ids_kwd", "source_doc_ids"):
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source_ids.update(_flatten_ids(row.get(field)))
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if source_ids:
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return bool(source_ids - excluded_doc_ids)
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doc_ids = _flatten_ids(row.get("doc_id"))
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return not doc_ids or bool(doc_ids - excluded_doc_ids)
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async def build_bucket(index_name, kb_id, scope: dict, excluded_doc_ids: set[str] | None = None) -> tuple[list[dict], list[dict]]:
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"""Build one bucket's ``(entities, relations)`` from raw rows.
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``scope`` is the filter WITHOUT ``knowledge_graph_kwd`` — e.g.
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``{"doc_id":[id], "compilation_template_ids":[tid]}`` (document scope) or
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``{"compilation_template_ids":[tid]}`` (dataset scope). Small buckets are
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returned whole; large ones are sampled: top-``GRAPH_TOP_ENTITIES`` entities
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by ``mention_count_int``, the relations sourced from them, and those
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relations' target entities.
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"""
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excluded_doc_ids = excluded_doc_ids or set()
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both_cond = dict(scope, knowledge_graph_kwd=["entity", "relation"])
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_, total = await graph_search(index_name, kb_id, ["id"], both_cond, OrderByExpr(), 1)
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if total < GRAPH_FULL_THRESHOLD:
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field_map, _ = await graph_search(index_name, kb_id, GRAPH_ALL_FIELDS, both_cond, OrderByExpr(), total or 1)
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entities: list[dict] = []
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relations: list[dict] = []
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for row in field_map.values():
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if not _row_has_enabled_source(row, excluded_doc_ids):
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continue
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if row.get("knowledge_graph_kwd") == "relation":
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edge = project_relation(row)
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if edge:
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relations.append(edge)
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else:
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node = project_entity(row)
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if node:
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entities.append(node)
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entities = dedup_entities(entities)
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return entities, normalize_relation_endpoints(entities, relations)
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# Large bucket: sample. A = top entities by mention_count_int desc.
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order_by = OrderByExpr()
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try:
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order_by.desc("mention_count_int")
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except Exception:
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order_by = OrderByExpr()
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set_a: list[dict] = []
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entity_offset = 0
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entity_total = None
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while len(set_a) < GRAPH_TOP_ENTITIES and (entity_total is None or entity_offset < entity_total):
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ent_a_map, entity_total = await graph_search(
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index_name,
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kb_id,
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GRAPH_ENTITY_FIELDS,
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dict(scope, knowledge_graph_kwd=["entity"]),
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order_by,
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GRAPH_TOP_ENTITIES,
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offset=entity_offset,
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)
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if not ent_a_map:
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break
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set_a.extend(n for n in (project_entity(r) for r in ent_a_map.values() if _row_has_enabled_source(r, excluded_doc_ids)) if n)
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entity_offset += len(ent_a_map)
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set_a = set_a[:GRAPH_TOP_ENTITIES]
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a_names = sorted({str(e.get("name") or "").strip() for e in set_a if str(e.get("name") or "").strip()})
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a_name_terms = sorted({term for name in a_names for term in _endpoint_terms(name)})
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# relations whose source is one of A.
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relations = []
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target_names_lower: set[str] = set()
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if a_name_terms:
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rel_map, _ = await graph_search(index_name, kb_id, GRAPH_RELATION_FIELDS, dict(scope, knowledge_graph_kwd=["relation"], from_entity_kwd=a_name_terms), OrderByExpr(), GRAPH_EXPANSION_CAP)
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for row in rel_map.values():
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if not _row_has_enabled_source(row, excluded_doc_ids):
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continue
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edge = project_relation(row)
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if edge:
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relations.append(edge)
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tgt = str(edge.get("to") or "").strip().lower()
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if tgt:
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target_names_lower.add(tgt)
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# target entities of those relations (case-insensitive via name_kwd).
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set_t = []
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if target_names_lower:
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tgt_map, _ = await graph_search(index_name, kb_id, GRAPH_ENTITY_FIELDS, dict(scope, knowledge_graph_kwd=["entity"], name_kwd=sorted(target_names_lower)), OrderByExpr(), GRAPH_EXPANSION_CAP)
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set_t = [n for n in (project_entity(r) for r in tgt_map.values() if _row_has_enabled_source(r, excluded_doc_ids)) if n]
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entities = dedup_entities(set_a + set_t)
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return entities, normalize_relation_endpoints(entities, relations)
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async def keyword_subgraph(
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index_name,
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kb_id,
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embd_mdl,
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base_entity_condition,
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keywords,
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scope_for_template,
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log_ctx="",
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excluded_doc_ids: set[str] | None = None,
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) -> tuple[dict | None, list[dict], list[dict]]:
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"""Find matching entity rows and return their focused subgraph.
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BM25 provides lexical candidates which are then filtered by entity-name
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containment. KNN is used as a semantic fallback when lexical search has
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no valid candidates. Matching entities and their touching neighbors are
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returned; ``tree`` and ``page_index`` buckets additionally include the
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full ancestor path to the root. ``(None, [], [])`` is returned when
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nothing matches or embedding is unavailable.
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``base_entity_condition`` scopes the KNN (e.g. ``{"doc_id":[id],
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"knowledge_graph_kwd":["entity"]}`` or ``{"compilation_template_ids":[...],
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"knowledge_graph_kwd":["entity"]}``). ``scope_for_template(row)`` resolves
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``(bucket_meta, scope_filter)`` for the matched row (scope WITHOUT
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``knowledge_graph_kwd``).
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"""
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from common.doc_store.doc_store_base import MatchDenseExpr, MatchTextExpr
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excluded_doc_ids = excluded_doc_ids or set()
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top_fields = GRAPH_ENTITY_FIELDS + ["compilation_template_ids", "compile_kwd", "compilation_template_kind_kwd"]
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def _valid_top_nodes(rows):
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valid = []
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for row in rows.values():
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if not _row_has_enabled_source(row, excluded_doc_ids):
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continue
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node = project_entity(row)
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if node and str(node.get("name") or "").strip():
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valid.append((row, node))
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return valid
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def _name_matches_query(node, query):
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name = str(node.get("name") or "").strip().lower()
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query = query.lower()
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if not name or not query:
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return False
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if query in name:
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return True
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terms = [term for term in query.split() if term]
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return bool(terms) and all(term in name for term in terms)
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# Entity names are identifiers in the graph. Prefer lexical matching so
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# an exact title/entity name wins over a semantically similar row such as
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# a navigation or summary record.
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text_query = re.sub(r"[ :|\r\n\t,,。??/`!!&^%()\[\]{}<>*~'\"\\=]+", " ", str(keywords)).strip()
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candidates = []
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if text_query:
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text_expr = MatchTextExpr(
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["content_ltks^10", "content_sm_ltks"],
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text_query,
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GRAPH_KEYWORD_CANDIDATES,
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{"original_query": keywords},
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)
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top_map, _ = await graph_search(index_name, kb_id, top_fields, base_entity_condition, OrderByExpr(), GRAPH_KEYWORD_CANDIDATES, match_expressions=[text_expr])
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candidates = [(row, node) for row, node in _valid_top_nodes(top_map) if _name_matches_query(node, text_query)]
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# In a hierarchical index, a title containing the keyword is usually an
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# ancestor context, not the requested detail. Prefer matching detail
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# entities so the title is added only through the path-to-root walk; this
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# prevents all of the title's unrelated children from being returned.
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detail_candidates = [(row, node) for row, node in candidates if str(node.get("type") or "").strip().lower() != "title"]
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if detail_candidates:
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candidates = detail_candidates
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# Fall back to semantic matching for aliases, paraphrases, and cases
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# where the query does not occur in the stored entity name.
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if not candidates:
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try:
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qv, _ = await thread_pool_exec(embd_mdl.encode_queries, keywords)
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vec = list(qv)
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except Exception:
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logging.exception("structure graph: keyword embedding failed (%s)", log_ctx)
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return None, [], []
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if not vec:
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return None, [], []
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match_expr = MatchDenseExpr(
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vector_column_name=f"q_{len(vec)}_vec",
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embedding_data=vec,
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embedding_data_type="float",
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distance_type="cosine",
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topn=GRAPH_KEYWORD_CANDIDATES,
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extra_options={"similarity": 0.3},
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)
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top_map, _ = await graph_search(index_name, kb_id, top_fields, base_entity_condition, OrderByExpr(), GRAPH_KEYWORD_CANDIDATES, match_expressions=[match_expr])
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candidates = _valid_top_nodes(top_map)
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if not candidates:
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||
return None, [], []
|
||
bucket_meta, scope = scope_for_template(candidates[0][0])
|
||
|
||
# A response represents one template bucket. Keep all matching entities
|
||
# from that bucket instead of silently discarding every candidate after
|
||
# the first one.
|
||
bucket_id = bucket_meta.get("template_id")
|
||
matched_nodes = []
|
||
for row, node in candidates:
|
||
candidate_meta, _ = scope_for_template(row)
|
||
if candidate_meta.get("template_id") == bucket_id:
|
||
matched_nodes.append(node)
|
||
if not matched_nodes:
|
||
return None, [], []
|
||
|
||
structure_kind = str(bucket_meta.get("kind") or "").strip().lower().replace("-", "_")
|
||
|
||
# Relations where a matched entity is source OR target (two term queries).
|
||
relations: list[dict] = []
|
||
seen_rel: set[tuple[str, str, str]] = set()
|
||
neighbor_names_lower: set[str] = set()
|
||
matched_names = {str(node.get("name") or "").strip().lower() for node in matched_nodes}
|
||
if structure_kind not in {"tree", "page_index", "pageindex"}:
|
||
for matched_node in matched_nodes:
|
||
matched_name = str(matched_node.get("name") or "").strip()
|
||
matched_name_terms = _endpoint_terms(matched_name)
|
||
for field in ("from_entity_kwd", "to_entity_kwd"):
|
||
rel_map, _ = await graph_search(
|
||
index_name, kb_id, GRAPH_RELATION_FIELDS, dict(scope, knowledge_graph_kwd=["relation"], **{field: matched_name_terms}), OrderByExpr(), GRAPH_EXPANSION_CAP
|
||
)
|
||
for row in rel_map.values():
|
||
if not _row_has_enabled_source(row, excluded_doc_ids):
|
||
continue
|
||
edge = project_relation(row)
|
||
if not edge:
|
||
continue
|
||
key = (edge.get("from", ""), edge.get("to", ""), edge.get("type", ""))
|
||
if key in seen_rel:
|
||
continue
|
||
seen_rel.add(key)
|
||
relations.append(edge)
|
||
for endpoint in (edge.get("from", ""), edge.get("to", "")):
|
||
endpoint = str(endpoint).strip()
|
||
if endpoint and endpoint.lower() not in matched_names:
|
||
neighbor_names_lower.add(endpoint.lower())
|
||
if len(relations) >= GRAPH_EXPANSION_CAP:
|
||
break
|
||
if len(relations) >= GRAPH_EXPANSION_CAP:
|
||
break
|
||
if len(relations) >= GRAPH_EXPANSION_CAP:
|
||
break
|
||
|
||
# Tree-like structures encode hierarchy as parent -> child. A keyword may
|
||
# hit a leaf, but the UI needs the complete path back to the root in order
|
||
# to render that leaf in context. Walk the incoming edges until no new
|
||
# ancestor is found (or the global expansion cap is reached).
|
||
if structure_kind in {"tree", "page_index", "pageindex"} and len(relations) < GRAPH_EXPANSION_CAP:
|
||
ancestor_frontier = set(matched_names)
|
||
seen_ancestors = set(matched_names)
|
||
while ancestor_frontier and len(relations) < GRAPH_EXPANSION_CAP:
|
||
next_frontier: set[str] = set()
|
||
rel_map, _ = await graph_search(
|
||
index_name,
|
||
kb_id,
|
||
GRAPH_RELATION_FIELDS,
|
||
dict(scope, knowledge_graph_kwd=["relation"], to_entity_kwd=sorted(ancestor_frontier)),
|
||
OrderByExpr(),
|
||
GRAPH_EXPANSION_CAP - len(relations),
|
||
)
|
||
for row in rel_map.values():
|
||
if not _row_has_enabled_source(row, excluded_doc_ids):
|
||
continue
|
||
edge = project_relation(row)
|
||
if not edge:
|
||
continue
|
||
key = (edge.get("from", ""), edge.get("to", ""), edge.get("type", ""))
|
||
if key in seen_rel:
|
||
continue
|
||
seen_rel.add(key)
|
||
relations.append(edge)
|
||
parent = str(edge.get("from") or "").strip().lower()
|
||
if parent and parent not in seen_ancestors:
|
||
seen_ancestors.add(parent)
|
||
next_frontier.add(parent)
|
||
if len(relations) >= GRAPH_EXPANSION_CAP:
|
||
break
|
||
ancestor_frontier = next_frontier
|
||
neighbor_names_lower.update(next_frontier)
|
||
|
||
entities = list(matched_nodes)
|
||
if neighbor_names_lower:
|
||
nb_map, _ = await graph_search(index_name, kb_id, GRAPH_ENTITY_FIELDS, dict(scope, knowledge_graph_kwd=["entity"], name_kwd=sorted(neighbor_names_lower)), OrderByExpr(), GRAPH_EXPANSION_CAP)
|
||
entities.extend(n for n in (project_entity(r) for r in nb_map.values() if _row_has_enabled_source(r, excluded_doc_ids)) if n)
|
||
|
||
entities = dedup_entities(entities)
|
||
if structure_kind in {"tree", "page_index", "pageindex"}:
|
||
entity_names = {str(entity.get("name") or "").strip().lower() for entity in entities}
|
||
relations = [relation for relation in relations if str(relation.get("from") or "").strip().lower() in entity_names and str(relation.get("to") or "").strip().lower() in entity_names]
|
||
return bucket_meta, entities, normalize_relation_endpoints(entities, relations)
|