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ragflow/deepdoc/parser/excel_parser.py

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# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
#
import logging
import re
import sys
from io import BytesIO
import pandas as pd
from openpyxl import Workbook, load_workbook
from rag.nlp import find_codec
from rag.utils.lazy_image import LazyImage
# copied from `/openpyxl/cell/cell.py`
ILLEGAL_CHARACTERS_RE = re.compile(r"[\000-\010]|[\013-\014]|[\016-\037]")
class RAGFlowExcelParser:
@staticmethod
def _load_excel_to_workbook(file_like_object):
if isinstance(file_like_object, bytes):
file_like_object = BytesIO(file_like_object)
# Read first 4 bytes to determine file type
file_like_object.seek(0)
file_head = file_like_object.read(4)
file_like_object.seek(0)
if not (file_head.startswith(b"PK\x03\x04") or file_head.startswith(b"\xd0\xcf\x11\xe0")):
logging.info("Not an Excel file, converting CSV to Excel Workbook")
try:
file_like_object.seek(0)
df = pd.read_csv(file_like_object, on_bad_lines='skip')
return RAGFlowExcelParser._dataframe_to_workbook(df)
except Exception as e_csv:
raise Exception(f"Failed to parse CSV and convert to Excel Workbook: {e_csv}")
try:
return load_workbook(file_like_object, data_only=True)
except Exception as e:
logging.info(f"openpyxl load error: {e}, try pandas instead")
try:
file_like_object.seek(0)
Add fallback to use 'calamine' parse engine in excel_parser.py (#9374) ### What problem does this PR solve? add fallback to `calamine` engine when parse error raised using the default `openpyxl` / `xlrd` engine. e.g. the following error can be fixed: ``` Traceback (most recent call last): File "/ragflow/deepdoc/parser/excel_parser.py", line 53, in _load_excel_to_workbook df = pd.read_excel(file_like_object) File "/ragflow/.venv/lib/python3.10/site-packages/pandas/io/excel/_base.py", line 495, in read_excel io = ExcelFile( File "/ragflow/.venv/lib/python3.10/site-packages/pandas/io/excel/_base.py", line 1567, in __init__ self._reader = self._engines[engine]( File "/ragflow/.venv/lib/python3.10/site-packages/pandas/io/excel/_xlrd.py", line 46, in __init__ super().__init__( File "/ragflow/.venv/lib/python3.10/site-packages/pandas/io/excel/_base.py", line 573, in __init__ self.book = self.load_workbook(self.handles.handle, engine_kwargs) File "/ragflow/.venv/lib/python3.10/site-packages/pandas/io/excel/_xlrd.py", line 63, in load_workbook return open_workbook(file_contents=data, **engine_kwargs) File "/ragflow/.venv/lib/python3.10/site-packages/xlrd/__init__.py", line 172, in open_workbook bk = open_workbook_xls( File "/ragflow/.venv/lib/python3.10/site-packages/xlrd/book.py", line 68, in open_workbook_xls bk.biff2_8_load( File "/ragflow/.venv/lib/python3.10/site-packages/xlrd/book.py", line 641, in biff2_8_load cd.locate_named_stream(UNICODE_LITERAL(qname)) File "/ragflow/.venv/lib/python3.10/site-packages/xlrd/compdoc.py", line 398, in locate_named_stream result = self._locate_stream( File "/ragflow/.venv/lib/python3.10/site-packages/xlrd/compdoc.py", line 429, in _locate_stream raise CompDocError("%s corruption: seen[%d] == %d" % (qname, s, self.seen[s])) xlrd.compdoc.CompDocError: Workbook corruption: seen[2] == 4 ``` ### Type of change - [x] Bug Fix (non-breaking change which fixes an issue)
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try:
dfs = pd.read_excel(file_like_object, sheet_name=None)
return RAGFlowExcelParser._dataframe_to_workbook(dfs)
Add fallback to use 'calamine' parse engine in excel_parser.py (#9374) ### What problem does this PR solve? add fallback to `calamine` engine when parse error raised using the default `openpyxl` / `xlrd` engine. e.g. the following error can be fixed: ``` Traceback (most recent call last): File "/ragflow/deepdoc/parser/excel_parser.py", line 53, in _load_excel_to_workbook df = pd.read_excel(file_like_object) File "/ragflow/.venv/lib/python3.10/site-packages/pandas/io/excel/_base.py", line 495, in read_excel io = ExcelFile( File "/ragflow/.venv/lib/python3.10/site-packages/pandas/io/excel/_base.py", line 1567, in __init__ self._reader = self._engines[engine]( File "/ragflow/.venv/lib/python3.10/site-packages/pandas/io/excel/_xlrd.py", line 46, in __init__ super().__init__( File "/ragflow/.venv/lib/python3.10/site-packages/pandas/io/excel/_base.py", line 573, in __init__ self.book = self.load_workbook(self.handles.handle, engine_kwargs) File "/ragflow/.venv/lib/python3.10/site-packages/pandas/io/excel/_xlrd.py", line 63, in load_workbook return open_workbook(file_contents=data, **engine_kwargs) File "/ragflow/.venv/lib/python3.10/site-packages/xlrd/__init__.py", line 172, in open_workbook bk = open_workbook_xls( File "/ragflow/.venv/lib/python3.10/site-packages/xlrd/book.py", line 68, in open_workbook_xls bk.biff2_8_load( File "/ragflow/.venv/lib/python3.10/site-packages/xlrd/book.py", line 641, in biff2_8_load cd.locate_named_stream(UNICODE_LITERAL(qname)) File "/ragflow/.venv/lib/python3.10/site-packages/xlrd/compdoc.py", line 398, in locate_named_stream result = self._locate_stream( File "/ragflow/.venv/lib/python3.10/site-packages/xlrd/compdoc.py", line 429, in _locate_stream raise CompDocError("%s corruption: seen[%d] == %d" % (qname, s, self.seen[s])) xlrd.compdoc.CompDocError: Workbook corruption: seen[2] == 4 ``` ### Type of change - [x] Bug Fix (non-breaking change which fixes an issue)
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except Exception as ex:
logging.info(f"pandas with default engine load error: {ex}, try calamine instead")
file_like_object.seek(0)
df = pd.read_excel(file_like_object, engine="calamine")
Add fallback to use 'calamine' parse engine in excel_parser.py (#9374) ### What problem does this PR solve? add fallback to `calamine` engine when parse error raised using the default `openpyxl` / `xlrd` engine. e.g. the following error can be fixed: ``` Traceback (most recent call last): File "/ragflow/deepdoc/parser/excel_parser.py", line 53, in _load_excel_to_workbook df = pd.read_excel(file_like_object) File "/ragflow/.venv/lib/python3.10/site-packages/pandas/io/excel/_base.py", line 495, in read_excel io = ExcelFile( File "/ragflow/.venv/lib/python3.10/site-packages/pandas/io/excel/_base.py", line 1567, in __init__ self._reader = self._engines[engine]( File "/ragflow/.venv/lib/python3.10/site-packages/pandas/io/excel/_xlrd.py", line 46, in __init__ super().__init__( File "/ragflow/.venv/lib/python3.10/site-packages/pandas/io/excel/_base.py", line 573, in __init__ self.book = self.load_workbook(self.handles.handle, engine_kwargs) File "/ragflow/.venv/lib/python3.10/site-packages/pandas/io/excel/_xlrd.py", line 63, in load_workbook return open_workbook(file_contents=data, **engine_kwargs) File "/ragflow/.venv/lib/python3.10/site-packages/xlrd/__init__.py", line 172, in open_workbook bk = open_workbook_xls( File "/ragflow/.venv/lib/python3.10/site-packages/xlrd/book.py", line 68, in open_workbook_xls bk.biff2_8_load( File "/ragflow/.venv/lib/python3.10/site-packages/xlrd/book.py", line 641, in biff2_8_load cd.locate_named_stream(UNICODE_LITERAL(qname)) File "/ragflow/.venv/lib/python3.10/site-packages/xlrd/compdoc.py", line 398, in locate_named_stream result = self._locate_stream( File "/ragflow/.venv/lib/python3.10/site-packages/xlrd/compdoc.py", line 429, in _locate_stream raise CompDocError("%s corruption: seen[%d] == %d" % (qname, s, self.seen[s])) xlrd.compdoc.CompDocError: Workbook corruption: seen[2] == 4 ``` ### Type of change - [x] Bug Fix (non-breaking change which fixes an issue)
2025-08-12 12:41:33 +08:00
return RAGFlowExcelParser._dataframe_to_workbook(df)
except Exception as e_pandas:
raise Exception(f"pandas.read_excel error: {e_pandas}, original openpyxl error: {e}")
@staticmethod
def _clean_dataframe(df: pd.DataFrame):
def clean_string(s):
if isinstance(s, str):
return ILLEGAL_CHARACTERS_RE.sub(" ", s)
return s
return df.apply(lambda col: col.map(clean_string))
@staticmethod
def _fill_worksheet_from_dataframe(ws, df: pd.DataFrame):
for col_num, column_name in enumerate(df.columns, 1):
ws.cell(row=1, column=col_num, value=column_name)
for row_num, row in enumerate(df.values, 2):
for col_num, value in enumerate(row, 1):
ws.cell(row=row_num, column=col_num, value=value)
@staticmethod
def _dataframe_to_workbook(df):
if isinstance(df, dict) and len(df) > 1:
return RAGFlowExcelParser._dataframes_to_workbook(df)
df = RAGFlowExcelParser._clean_dataframe(df)
wb = Workbook()
ws = wb.active
ws.title = "Data"
RAGFlowExcelParser._fill_worksheet_from_dataframe(ws, df)
return wb
@staticmethod
def _dataframes_to_workbook(dfs: dict):
wb = Workbook()
default_sheet = wb.active
wb.remove(default_sheet)
for sheet_name, df in dfs.items():
df = RAGFlowExcelParser._clean_dataframe(df)
ws = wb.create_sheet(title=sheet_name)
RAGFlowExcelParser._fill_worksheet_from_dataframe(ws, df)
return wb
@staticmethod
def _extract_images_from_worksheet(ws, sheetname=None):
"""
Extract images from a worksheet and enrich them with vision-based descriptions.
Returns: List[dict]
"""
images = getattr(ws, "_images", [])
if not images:
return []
raw_items = []
for img in images:
try:
img_bytes = img._data()
lazy_img = LazyImage([img_bytes])
anchor = img.anchor
if hasattr(anchor, "_from") and hasattr(anchor, "_to"):
r1, c1 = anchor._from.row + 1, anchor._from.col + 1
r2, c2 = anchor._to.row + 1, anchor._to.col + 1
if r1 == r2 and c1 == c2:
span = "single_cell"
else:
span = "multi_cell"
else:
r1, c1 = anchor._from.row + 1, anchor._from.col + 1
r2, c2 = r1, c1
span = "single_cell"
item = {
"sheet": sheetname or ws.title,
"image": lazy_img,
"image_description": "",
"row_from": r1,
"col_from": c1,
"row_to": r2,
"col_to": c2,
"span_type": span,
}
raw_items.append(item)
except Exception:
continue
return raw_items
@staticmethod
def _get_actual_row_count(ws):
max_row = ws.max_row
if not max_row:
return 0
if max_row <= 10000:
return max_row
max_col = min(ws.max_column or 1, 50)
def row_has_data(row_idx):
for col_idx in range(1, max_col + 1):
cell = ws.cell(row=row_idx, column=col_idx)
if cell.value is not None and str(cell.value).strip():
return True
return False
if not any(row_has_data(i) for i in range(1, min(101, max_row + 1))):
return 0
left, right = 1, max_row
last_data_row = 1
while left <= right:
mid = (left + right) // 2
found = False
for r in range(mid, min(mid + 10, max_row + 1)):
if row_has_data(r):
found = True
last_data_row = max(last_data_row, r)
break
if found:
left = mid + 1
else:
right = mid - 1
for r in range(last_data_row, min(last_data_row + 500, max_row + 1)):
if row_has_data(r):
last_data_row = r
return last_data_row
@staticmethod
def _get_rows_limited(ws):
actual_rows = RAGFlowExcelParser._get_actual_row_count(ws)
if actual_rows == 0:
return []
return list(ws.iter_rows(min_row=1, max_row=actual_rows))
def html(self, fnm, chunk_rows=256):
from html import escape
file_like_object = BytesIO(fnm) if not isinstance(fnm, str) else fnm
wb = RAGFlowExcelParser._load_excel_to_workbook(file_like_object)
tb_chunks = []
def _fmt(v):
if v is None:
return ""
return str(v).strip()
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for sheetname in wb.sheetnames:
ws = wb[sheetname]
try:
rows = RAGFlowExcelParser._get_rows_limited(ws)
except Exception as e:
logging.warning(f"Skip sheet '{sheetname}' due to rows access error: {e}")
continue
if not rows:
continue
tb_rows_0 = "<tr>"
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for t in list(rows[0]):
tb_rows_0 += f"<th>{escape(_fmt(t.value))}</th>"
tb_rows_0 += "</tr>"
# rows[0] is the header; split the remaining data rows into
# ceil(n_data / chunk_rows) chunks. Using +1 here over-counts by one
# when the data-row count is an exact multiple of chunk_rows and emits
# a spurious header-only chunk.
n_data_rows = len(rows) - 1
for chunk_i in range((n_data_rows + chunk_rows - 1) // chunk_rows):
tb = ""
tb += f"<table><caption>{sheetname}</caption>"
tb += tb_rows_0
for r in list(rows[1 + chunk_i * chunk_rows : min(1 + (chunk_i + 1) * chunk_rows, len(rows))]):
tb += "<tr>"
for i, c in enumerate(r):
if c.value is None:
tb += "<td></td>"
else:
tb += f"<td>{escape(_fmt(c.value))}</td>"
tb += "</tr>"
tb += "</table>\n"
tb_chunks.append(tb)
return tb_chunks
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def markdown(self, fnm):
import pandas as pd
file_like_object = BytesIO(fnm) if not isinstance(fnm, str) else fnm
try:
file_like_object.seek(0)
df = pd.read_excel(file_like_object)
except Exception as e:
logging.warning(f"Parse spreadsheet error: {e}, trying to interpret as CSV file")
file_like_object.seek(0)
df = pd.read_csv(file_like_object, on_bad_lines='skip')
df = df.replace(r"^\s*$", "", regex=True)
return df.to_markdown(index=False)
def __call__(self, fnm):
file_like_object = BytesIO(fnm) if not isinstance(fnm, str) else fnm
wb = RAGFlowExcelParser._load_excel_to_workbook(file_like_object)
res = []
for sheetname in wb.sheetnames:
ws = wb[sheetname]
try:
rows = RAGFlowExcelParser._get_rows_limited(ws)
except Exception as e:
logging.warning(f"Skip sheet '{sheetname}' due to rows access error: {e}")
continue
if not rows:
continue
ti = list(rows[0])
for r in list(rows[1:]):
fields = []
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for i, c in enumerate(r):
if c.value is None or str(c.value).strip() == "":
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continue
t = str(ti[i].value) if i < len(ti) else ""
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t += ("" if t else "") + str(c.value)
fields.append(t)
if not fields:
continue
line = "; ".join(fields)
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if sheetname.lower().find("sheet") < 0:
line += " ——" + sheetname
res.append(line)
return res
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@staticmethod
def row_number(fnm, binary):
if fnm.split(".")[-1].lower().find("xls") >= 0:
wb = RAGFlowExcelParser._load_excel_to_workbook(BytesIO(binary))
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total = 0
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for sheetname in wb.sheetnames:
try:
ws = wb[sheetname]
total += RAGFlowExcelParser._get_actual_row_count(ws)
except Exception as e:
logging.warning(f"Skip sheet '{sheetname}' due to rows access error: {e}")
continue
return total
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if fnm.split(".")[-1].lower() in ["csv", "txt"]:
encoding = find_codec(binary)
txt = binary.decode(encoding, errors="ignore")
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return len(txt.split("\n"))
if __name__ == "__main__":
psr = RAGFlowExcelParser()
psr(sys.argv[1])