trailofbits__skills/plugins/trailmark/README.md

trailmark

Source code graph analysis for security auditing. Parses code into queryable graphs of functions, classes, and calls, then uses that structure for diagram generation, mutation testing triage, protocol verification, and differential review.

These skills support Trailmark 0.2.x through the 0.5.0 release line. Prefer --language auto, trailmark.parse.detect_languages() (0.3+), and QueryEngine.preanalysis() for the core workflow. Before using features added in v0.4.0 or v0.5.0, check the installed Trailmark version or probe for the method/CLI command first.

Compatibility

Use this guard before relying on version-gated features:

trailmark --version 2>/dev/null || uv run trailmark --version 2>/dev/null

Compare the reported version numerically. If it is 0.4.0 or newer, the expanded v0.4 feature set is available; 0.5.0 or newer adds the v0.5 set. If the command is missing or reports an older version, stay on the v0.2-safe baseline — the trailmark skill's Version Gate section has the authoritative list. (The version CLI itself was added in 0.2.2, so a missing command can also mean trailmark is not installed at all.)

v0.4.0 adds expanded parser coverage, explicit proxy nodes for unresolved calls, node origins (source, proxy, binary, synthetic), new edge kinds (resolves_to, type_uses, specializes, corresponds_to), subgraph edge and connection queries, generic/type-reference queries, the native trailmark diagram CLI, and binary graph augmentation via augment_binary().

v0.5.0 adds a PostgreSQL-oriented sql parser (with node kinds schema, table, view, procedure), the stable .trailmark/links.toml configuration for declaring cross-language/FFI/RPC/external links (external endpoints become proxy.external:<symbol> nodes), repository links/proxies/type_uses edges for single-language parses, Solidity entrypoints from parser metadata (visibility/mutability/overridden-by attributes, interfaces excluded), node attributes in attack_surface() entries, TypeScript constructed-receiver resolution, and C# file-scoped namespace support. It adds no new QueryEngine methods or CLI commands, so gate v0.5 features on the version number, not hasattr().

Prerequisites

Trailmark (source) must be installed:

uv pip install trailmark

Skills

Skill	Description
trailmark	Build and query multi-language source/binary code graphs with pre-analysis passes, version feature gates, proxy nodes, type/reference queries, cross-language link configuration, and structural traversal helpers
slicing-code-context	Build bounded graph-informed source packets and delegate focused work to constrained subagents
diagramming-code	Generate Mermaid diagrams from code graphs (call graphs, class hierarchies, complexity heatmaps, data flow); v0.4 native diagram support is feature-gated
crypto-protocol-diagram	Extract protocol message flow from source code or specs (RFC, ProVerif, Tamarin) into sequence diagrams
genotoxic	Triage mutation testing results using graph analysis — classify survived mutants as false positives, missing tests, or fuzzing targets
vector-forge	Mutation-driven test vector generation — find coverage gaps via mutation testing, then generate Wycheproof-style vectors that close them
graph-evolution	Compare code graphs at two snapshots to surface security-relevant structural changes text diffs miss
trailmark-review-gate	Apply PASS/WARN/FAIL/UNKNOWN structural gate rules to branch, PR, fix, or release diffs
mermaid-to-proverif	Convert Mermaid sequence diagrams into ProVerif formal verification models
audit-augmentation	Project SARIF, weAudit, and v0.4 binary-analysis graph findings onto code graphs as annotations and subgraphs
trailmark-finding-triage	Triage one finding, SARIF result, weAudit annotation, suspicious function, or report excerpt with reachability, taint, privilege-boundary, and blast-radius evidence
trailmark-variant-neighborhood	Expand one seed issue into graph-derived variant candidates for variant-analysis, Semgrep, CodeQL, or manual review
trailmark-summary	Quick structural overview (auto-detected languages, entry points, dependencies) for vivisect/galvanize
trailmark-structural	Full structural analysis with all pre-analysis passes (blast radius, taint, privilege boundaries, complexity)

Directory Structure

trailmark/
├── .claude-plugin/
│   └── plugin.json
├── agents/
│   └── code-slice-worker.md          # Repository-tool-free bounded worker
├── README.md
└── skills/
    ├── trailmark/                    # Core graph querying
    ├── slicing-code-context/         # Bounded source slicing and worker delegation
    ├── diagramming-code/             # Mermaid diagram generation
    │   └── scripts/diagram.py
    ├── crypto-protocol-diagram/      # Protocol flow extraction
    │   └── examples/
    ├── genotoxic/                    # Mutation testing triage
    ├── vector-forge/                 # Mutation-driven test vector generation
    │   └── references/
    ├── graph-evolution/              # Structural diff
    │   └── scripts/graph_diff.py
    ├── trailmark-review-gate/         # Structural review gates
    ├── mermaid-to-proverif/          # Sequence diagram → ProVerif
    │   └── examples/
    ├── audit-augmentation/           # SARIF/weAudit integration
    ├── trailmark-finding-triage/      # Single-finding evidence packets
    ├── trailmark-variant-neighborhood/ # Variant candidate neighborhoods
    ├── trailmark-summary/            # Quick overview for vivisect/galvanize
    └── trailmark-structural/         # Full structural analysis

Related Skills

Skill	Use For
mutation-testing	Guidance for running mutation frameworks (mewt, muton) — use before genotoxic for triage
differential-review	Text-level security diff review — complements graph-evolution's structural analysis
audit-context-building	Deep architectural context before vulnerability hunting
variant-analysis	Search for related candidates after trailmark-finding-triage identifies a repeatable root cause