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51 Commits

Author SHA1 Message Date
Reuven ea8cbf697b fix(@claude-flow/embeddings@3.0.0-alpha.16): Windows ERR_PACKAGE_PATH_NOT_EXPORTED
Closes #1468.

`downloadEmbeddingModel`'s catch regex only matched
`Cannot find package` / `Cannot find module`. On Windows + Node strict
ESM, the bundled `agentic-flow`'s `package.json` doesn't declare a
`./embeddings` subpath, which raises a different shape:

  Package subpath './embeddings' is not defined by "exports" in
  C:\...\node_modules\agentic-flow\package.json

That message didn't match either branch of the existing regex, so the
error re-threw all the way up to `ruflo embeddings init` and broke the
init flow on Windows even though the rest of the embedding pipeline
(@xenova/transformers ONNX) doesn't actually need agentic-flow.

Fix: extend the regex to also catch:
  - `Package subpath '\./embeddings' is not defined`
  - `ERR_PACKAGE_PATH_NOT_EXPORTED`

When matched, falls back to the same lazy-fetch path as the missing-
package case — model downloads on first generate via @xenova.

The other three `import('agentic-flow/embeddings')` sites in this file
(init, isNeuralAvailable, listEmbeddingModels) already wrap their
imports in try/catch that returns a neutral value, so they degrade
gracefully on this same error.

Verified the new regex matches the Windows error string exactly.
WSL/Linux behavior unchanged (those resolve agentic-flow successfully).

Published @claude-flow/embeddings@3.0.0-alpha.16 (alpha + latest tags).
The cli's optional-dep range `^3.0.0-alpha.12` resolves to alpha.16 for
fresh installs, so `npx ruflo@latest embeddings init` picks up the fix
without a cli/umbrella republish.

Co-Authored-By: RuFlo <ruv@ruv.net>
2026-05-08 10:06:36 -04:00
rUv 229d273a1f fix(init): #1744 honest defaults + runtime fallbacks (v3.6.28) (#1753)
* fix(init): #1744 honest defaults — --no-global, --minimal hooks gate, README install paths (v3.6.28)

Three fixes from @ruvnet's install-study (issue #1744) plus three
already-on-disk runtime honesty fixes:

#1744 changes (this commit):

1. **--no-global flag** for `init` (and codex/dual variants) — opt out
   of the user-global ~/.claude/CLAUDE.md "Ruflo Integration" pointer
   block append. Default behavior unchanged (block still appended once,
   idempotent — but now opt-out is documented). #1744 #2.

2. **--minimal hooks gate** in settings-generator. Before this commit,
   `--minimal` wrote .claude/settings.json with 4 hook decls pointing at
   .claude/helpers/hook-handler.cjs but didn't install the helpers
   directory — so every hook fired and silently failed. Now the hooks
   block only emits when components.helpers is true. Minimal stays
   minimal AND functional. #1744 #3.

3. **README Quick Start labeling** — added a head-to-head table
   distinguishing Plugin install (lite, slash commands only, no MCP)
   from CLI install (full Ruflo loop, MCP registered, hooks installed).
   The previous README marketed both equally as "Recommended" which
   surprised users who chose plugin install and found the MCP tools
   missing. #1744 #1.

Already-on-disk runtime honesty fixes (bundled in this release):

4. v3/@claude-flow/cli/src/commands/performance.ts — drop unverified
   "Flash Attention 2.49x speedup" optimize/bottleneck recommendations.
   Re-tagged as "in progress, currently JS reference impl".

5. v3/@claude-flow/cli/src/mcp-tools/neural-tools.ts — drop the silent
   Tier 4 mock-fallback in embedding resolution. If Tier 1 (agentic-flow)
   and Tier 3 (ONNX) both failed to import, leave realEmbeddings null
   and let the explicit hash-fallback path run with a clear
   _embeddingNote in stats. Silently substituting mock embeddings hid a
   missing production dependency from callers.

6. v3/@claude-flow/embeddings/src/embedding-service.ts — throw on
   unknown provider / no-real-provider-available paths instead of
   silently substituting MockEmbeddingService. Mock embeddings are
   tests-only; production code that lands on the mock path
   accidentally is a bug, and silent fallback hid it.

All TypeScript clean (tsc --noEmit). Build verified — all 3 fixes
present in dist/.

Closes #1744 (3 of 5 papercuts; remaining 2 are doc-only, addressed
in PR #1751).

Co-Authored-By: RuFlo <ruv@ruv.net>

* chore(release): bump to 3.6.28 — published to npm

  @claude-flow/cli@3.6.28 → tags: latest, alpha, v3alpha
  claude-flow@3.6.28      → tags: latest, alpha, v3alpha
  ruflo@3.6.28            → tags: latest, alpha, v3alpha

Includes: #1744 (--no-global, --minimal hooks gate, README install
labeling) + runtime honesty fixes (drop unverified Flash Attention
claim, drop silent mock embedding fallback, throw on missing real
embedding provider).

Co-Authored-By: RuFlo <ruv@ruv.net>

* chore(release): regen verification witness for 3.6.28

  totalFixes: 27 → 55 (adds CAP-MCP capability inventory: 300 tools
                       across 28 source files)
  releases:   3.6.24 → 3.6.28 (current published)
  manifestHash + signature regenerated from current git commit

Includes the #1744 + runtime-honesty fixes shipped in 3.6.28.

Run `node scripts/regenerate-witness.mjs` after each release.

Co-Authored-By: RuFlo <ruv@ruv.net>

---------

Co-authored-by: Reuven <cohen@ruv-mac-mini.local>
2026-05-05 09:46:35 -04:00
Reuven 21f668c550 feat: implement ADR-094 transformers migration + ADR-095 gap tracking
ADR-094 — transformers loader (try-prefer-fallback):
- New v3/@claude-flow/embeddings/src/transformers-loader.ts exposes
  loadTransformersPipeline() that prefers @huggingface/transformers
  (clears protobufjs <7.5.5 critical RCE chain), falls back to legacy
  @xenova/transformers for backwards compat. Caches the resolved
  source so repeated callers don't re-import.
- Updated v3/@claude-flow/embeddings/src/embedding-service.ts:387 to
  use the loader instead of direct @xenova import.
- Updated v3/@claude-flow/cli/src/memory/memory-initializer.ts:1539
  with inlined try-prefer-fallback (avoids circular optional-dep at
  install time).
- v3/@claude-flow/embeddings/package.json: added @huggingface/transformers
  to optionalDependencies (^4.2.0) and peerDependenciesMeta.optional.

Both packages build clean. The loader uses a string-variable specifier
in dynamic import so tsc doesn't try to resolve types at compile time
(both packages are runtime-optional).

ADR-095 — architectural gap tracking from April audit (@roman-rr):
- Documents the 7 gaps the May audit/ADR-093 honesty work didn't
  address: G1 agent_spawn no subprocess, G2 single-process consensus,
  G3 workflow runtime missing, G4 WASM echo stub, G5 transformers
  CVE chain (now ADR-094), G6 auto-memory graph 100MB bloat for 20
  unique entries, G7 6 disabled AgentDB controllers.
- Reserves ADR-096..ADR-107 numbers for the per-gap follow-up ADRs.
- Explicit "tracking only — no decisions" status so gaps don't dilute
  through the issue tracker.

Co-Authored-By: RuFlo <ruv@ruv.net>
2026-05-03 17:44:11 -04:00
Reuven 53409aba5f fix(embeddings): handle agentic-flow shape change in 3.0.0-alpha.14
Regression caught by 3.6.15 smoke test: with agentic-flow auto-installed
as an optional dep, `import('agentic-flow/embeddings')` succeeds but
the loaded module exposes `clearEmbeddingCache`/`computeEmbedding`/
`computeEmbeddingBatch`/`getEmbeddingDimensions` — no `downloadModel`.

3.0.0-alpha.13 only handled the "package missing" path. With agentic-
flow present but the function absent, it threw `downloadModel is not a
function` straight up to the CLI's `embeddings init` action, which
reported `[ERROR] Initialization failed: downloadModel is not a function`.

3.0.0-alpha.14 checks `typeof downloadFn === 'function'` before
calling and falls through to the same lazy-fetch warning otherwise.
@xenova/transformers downloads on first generate() either way.

Verified in clean smoke install with cache cleaned:
  $ ruflo embeddings init --force
  Initialize Embedding Subsystem
  ...
  Next steps:
    - embeddings generate -t "test text"  - Test embedding generation
    ...

Co-Authored-By: RuFlo <ruv@ruv.net>
2026-05-03 17:04:31 -04:00
Reuven 4f2f68d52c fix(embeddings): graceful agentic-flow fallback in downloadEmbeddingModel
#1700 item 2: `embeddings init` failed with `Cannot find package
'agentic-flow'` because downloadEmbeddingModel did not catch the dynamic
import error, even though agentic-flow is declared as an optional peer.
Now logs an informative warning and returns the target dir as a no-op
success — @xenova/transformers fetches the model lazily on first
embeddings_generate call.

Bumps @claude-flow/embeddings to 3.0.0-alpha.13. ruflo@3.6.14 picks it
up automatically via caret range.

Verified in clean /tmp install:
  $ node -e "import('@claude-flow/embeddings').then(m =>
    m.downloadEmbeddingModel('Xenova/all-MiniLM-L6-v2', '/tmp/test-models'))"
  [embeddings] agentic-flow not installed — skipping eager model download.
  Models will be fetched lazily by @xenova/transformers on first generate.
  downloadEmbeddingModel returned: "/tmp/test-models"
  PASS — graceful fallback worked

Previously this threw "Cannot find package 'agentic-flow' imported from
.../@claude-flow/embeddings/dist/neural-integration.js".

Co-Authored-By: RuFlo <ruv@ruv.net>
2026-05-03 16:42:47 -04:00
Reuven 5151aa9b24 fix: monorepo-wide test fixes — all 20 packages green (5,370 tests)
Fixes across 8 packages to achieve 100% test pass rate:

- shared: sql.js getAsObject([]) fix for event-store stats; ESM fs import
- memory: hybrid-backend tests tolerate degraded health status
- embeddings: infinite-loop fix in chunking (overlap >= maxChunkSize);
  euclidean similarity test; vitest config cleanup
- hooks: guidance-provider test timeout (5s → 15s)
- browser: test mock corrected to execFileSync call signature
- plugins: HookBuilder missing when/handle/transform methods; TestPlugin
  state shadowing fix; dep version parsing (name@version); conflict error
  propagation; namespace strategy renames both entries; restoreState API
- integration: getCompactContext DB error handling; topology always
  hierarchical (anti-drift); batch size cap at 5
- aidefence/deployment/integration/providers: local vitest.config.ts
  to discover src/__tests__/ test files

Co-Authored-By: claude-flow <ruv@ruv.net>
2026-04-28 09:27:25 -04:00
rUv dc8463872d feat(ADR-057): RVF native storage with security hardening (#1244)
* docs: add ADR-057 — RVF native storage backend to replace sql.js

Proposes replacing the 18MB sql.js WASM SQLite dependency with
RuVector Format (RVF) across @claude-flow/shared, memory, and
embeddings packages. Includes automatic and manual migration paths
for existing .db and .json files with full backward compatibility.

Key benefits: -18MB install size, 150x-12,500x faster vector search
via native HNSW, quantization support, crash-safe append-only format.

Co-Authored-By: claude-flow <ruv@ruv.net>

* docs: extend ADR-057 with RVF embedding provider, ruvLLM persistence, and progressive download

Add three major sections to ADR-057:

- Section 3A: RVF as 5th EmbeddingProvider (52KB WASM replaces 540MB
  agentic-flow for basic use cases). Updated auto-select hierarchy:
  rvf > agentic-flow > transformers > mock.

- Section 3B: ruvLLM learning persistence via RVF segments. SONA
  patterns (ReasoningBank), LoRA adapters, and EWC++ weights now
  survive process restarts. RuVectorProvider.searchMemory works
  offline via RVF without HTTP server.

- Section 10: Progressive download architecture. Replaces npm
  optionalDependencies (all-or-nothing 1.3GB) with on-demand
  capability downloads stored as .rvf files. 5 phases from 22MB
  core CLI to full LLM/CNN/GNN/kernel capabilities.

Implementation plan expanded from 5 to 8 phases. Testing strategy
updated with 11 new test cases covering the additions.

Co-Authored-By: claude-flow <ruv@ruv.net>

* feat: add optimized Docker images for Ruflo lite/full/workers

- Dockerfile: Multi-stage Alpine build with aggressive dependency pruning.
  Result: 324MB image, 0.6s startup (vs 1.3GB/35s baseline).
  Uses --omit=optional + explicit rm -rf of heavy transitive deps.

- Dockerfile.full: Full image variant with all optional dependencies
  including native compilation (onnxruntime-node, better-sqlite3).

- Dockerfile.headless: Updated from node:20 to node:22, claude-flow
  branding to ruflo, same prune strategy as lite.

- docker-compose.yml: Three profiles (lite, full, workers) with
  appropriate resource limits and health checks.

- .dockerignore: Excludes node_modules, tests, source maps, IDE
  configs, and secrets from build context.

Co-Authored-By: claude-flow <ruv@ruv.net>

* feat(ADR-057): implement RVF native storage backend across all packages

Replace sql.js (18MB WASM) with zero-dependency RVF format across
memory, events, embeddings, and learning subsystems. Pure TypeScript
fallback with optional native @ruvector/rvf acceleration.

New files:
- memory/rvf-backend.ts: IMemoryBackend impl with HNSW + binary persistence
- memory/hnsw-lite.ts: Lightweight HNSW graph for vector search
- memory/rvf-learning-store.ts: SONA pattern/LoRA/EWC/trajectory persistence
- memory/persistent-sona.ts: PersistentSonaCoordinator wrapping learning store
- shared/events/rvf-event-log.ts: Append-only event log (replaces EventStore)
- embeddings/rvf-embedding-cache.ts: Binary file embedding cache (FNV-1a keys)
- embeddings/rvf-embedding-service.ts: Hash-based embedding provider (<0.1ms)

Integrations:
- DatabaseProvider: 'rvf' added, auto-selected first (always available)
- EmbeddingProvider: 'rvf' added, auto-selected first in async factory
- All packages export new RVF types and classes

Tests: 163 passing (5 suites), validated in Docker (node:22-alpine)
- rvf-backend: 50 tests (CRUD, query, search, persistence, HNSW)
- rvf-event-log: 33 tests (append, replay, snapshots, crash recovery)
- rvf-embeddings: 30 tests (cache, service, determinism, normalization)
- rvf-learning-store: 31 tests (patterns, LoRA, EWC, trajectories)
- rvf-integration: 19 tests (provider selection, migration, concurrency)

Co-Authored-By: claude-flow <ruv@ruv.net>

* fix(ADR-057): harden RVF storage with security, performance, and migration

Security: atomic writes (tmp+rename) across all backends, path validation,
input validation at boundaries. Performance: persist lock prevents concurrent
flushes, stack overflow fix for large datasets, timer.unref() prevents hangs,
O(1) eviction lookup in embedding cache. New: bidirectional RVF migration
utility (JSON/SQLite/RVF), format v2 with backward compat, auto-persist
patterns and trajectories before eviction. Added HnswLite and RvfMigrator
exports. 193 tests passing, 0 TS errors.

Refs #1242

Co-Authored-By: claude-flow <ruv@ruv.net>

* fix: doctor version detection and init settings warnings (#1235, #1230)

doctor: Replace unreliable path-walking heuristic with import.meta.url
traversal to find the correct package.json. Removes stale npx cache
scanning that could report wrong versions. Fixes #1235.

init: Remove invalid TeammateIdle and TaskCompleted keys from generated
.claude/settings.json hooks section. These are not recognized by Claude
Code and caused warnings. Config remains available under the claudeFlow
namespace. Fixes #1230.

Co-Authored-By: claude-flow <ruv@ruv.net>

* fix(doctor): remove Windows-incompatible shell redirects, simplify root detection

- Remove fragile Windows root calculation (split on backslash); use
  dirname(dir) === dir instead which works on all platforms
- Remove 2>/dev/null from npm view command (fails on Windows cmd.exe);
  the catch block handles errors gracefully already

Co-Authored-By: claude-flow <ruv@ruv.net>

* security: harden RVF against crafted files and race conditions

- rvf-backend: validate dimensions (1-10000), validate RVF header
  structure and size before JSON.parse, guard persist interval
  against concurrent flushes
- rvf-embedding-cache: use random suffix for tmp files to prevent
  predictable-path attacks on multi-user systems
- rvf-event-log: add 100MB max payload size limit to prevent DoS
  from crafted event log files
- rvf-migration: add null byte and type validation on all paths

Co-Authored-By: claude-flow <ruv@ruv.net>
2026-02-27 21:46:53 -05:00
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- Branch: v3
- Timestamp: 2026-01-07T04:16:33Z
- Changes: 2 file(s)

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
2026-01-07 04:16:33 +00:00
rUv 294a666c5f Checkpoint: File edits
Automatic checkpoint created by Claude Code
- Branch: v3
- Timestamp: 2026-01-07T04:16:22Z
- Changes: 2 file(s)

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
2026-01-07 04:16:22 +00:00
rUv d65a92cf5a Checkpoint: File edits
Automatic checkpoint created by Claude Code
- Branch: v3
- Timestamp: 2026-01-07T04:16:14Z
- Changes: 1 file(s)

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
2026-01-07 04:16:14 +00:00
rUv 5fc0a952fc Checkpoint: File edits
Automatic checkpoint created by Claude Code
- Branch: v3
- Timestamp: 2026-01-07T04:16:03Z
- Changes: 1 file(s)

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
2026-01-07 04:16:03 +00:00
rUv 2e79526c1f Checkpoint: File edits
Automatic checkpoint created by Claude Code
- Branch: v3
- Timestamp: 2026-01-07T04:11:19Z
- Changes: 1 file(s)

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
2026-01-07 04:11:19 +00:00
rUv 657be59da7 Checkpoint: File edits
Automatic checkpoint created by Claude Code
- Branch: v3
- Timestamp: 2026-01-07T04:00:28Z
- Changes: 2 file(s)

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
2026-01-07 04:00:28 +00:00
rUv 33c4d5d25e Checkpoint: File edits
Automatic checkpoint created by Claude Code
- Branch: v3
- Timestamp: 2026-01-07T04:00:04Z
- Changes: 2 file(s)

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
2026-01-07 04:00:04 +00:00
rUv cb4f3f1a73 Checkpoint: File edits
Automatic checkpoint created by Claude Code
- Branch: v3
- Timestamp: 2026-01-07T03:59:24Z
- Changes: 1 file(s)

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
2026-01-07 03:59:24 +00:00
rUv d14e4b3b23 Checkpoint: File edits
Automatic checkpoint created by Claude Code
- Branch: v3
- Timestamp: 2026-01-07T03:59:23Z
- Changes: 1 file(s)

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
2026-01-07 03:59:23 +00:00
rUv 501217940e Checkpoint: File edits
Automatic checkpoint created by Claude Code
- Branch: v3
- Timestamp: 2026-01-07T03:58:55Z
- Changes: 1 file(s)

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
2026-01-07 03:58:55 +00:00
rUv b999225cb3 Checkpoint: File edits
Automatic checkpoint created by Claude Code
- Branch: v3
- Timestamp: 2026-01-07T03:58:03Z
- Changes: 2 file(s)

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
2026-01-07 03:58:03 +00:00
rUv 8171680338 Checkpoint: File edits
Automatic checkpoint created by Claude Code
- Branch: v3
- Timestamp: 2026-01-07T03:57:23Z
- Changes: 1 file(s)

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
2026-01-07 03:57:23 +00:00
rUv 57db503080 Checkpoint: File edits
Automatic checkpoint created by Claude Code
- Branch: v3
- Timestamp: 2026-01-07T03:56:36Z
- Changes: 1 file(s)

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
2026-01-07 03:56:36 +00:00
rUv 1815c63b39 Checkpoint: File edits
Automatic checkpoint created by Claude Code
- Branch: v3
- Timestamp: 2026-01-07T03:56:19Z
- Changes: 2 file(s)

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
2026-01-07 03:56:19 +00:00
rUv 39ea57d107 Checkpoint: File edits
Automatic checkpoint created by Claude Code
- Branch: v3
- Timestamp: 2026-01-07T03:55:47Z
- Changes: 1 file(s)

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
2026-01-07 03:55:47 +00:00
rUv 1e85414fce Checkpoint: File edits
Automatic checkpoint created by Claude Code
- Branch: v3
- Timestamp: 2026-01-07T03:55:39Z
- Changes: 1 file(s)

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
2026-01-07 03:55:39 +00:00
rUv 7526e59064 Checkpoint: File edits
Automatic checkpoint created by Claude Code
- Branch: v3
- Timestamp: 2026-01-07T03:55:37Z
- Changes: 6 file(s)

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
2026-01-07 03:55:38 +00:00
rUv 6af1310c0a feat(agent): Task completed:
🚀 Generated with [Claude Code](https://claude.com/claude-code)
📊 V3 Development Progress Checkpoint

Co-Authored-By: Claude Sonnet 4 <noreply@anthropic.com>
2026-01-05 19:12:36 +00:00
rUv 6ee718a6bc checkpoint: File edit:
🚀 Generated with [Claude Code](https://claude.com/claude-code)
📊 V3 Development Progress Checkpoint

Co-Authored-By: Claude Sonnet 4 <noreply@anthropic.com>
2026-01-05 17:28:09 +00:00