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https://github.com/proffesor-for-testing/agentic-qe.git
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Dragan Spiridonov
77d3f09159
Headline change: native HNSW search actually works again. The previous
NativeHnswBackend wrapped @ruvector/router 0.1.28's VectorDb, which a
fresh investigation found to have four serious bugs:
1. HNSW search returned essentially random results — recall@10 ≈ 0%
on the project's FNV fixture and 10% on textbook unit-Gaussian
random vectors. The graph walk could not find self-vectors when
querying with a stored vector.
2. The VectorDb constructor unconditionally wrote a vectors.db redb
file to the user's project root, polluting CWD with multi-MB
files outside .agentic-qe/, in a non-SQLite format that no AQE
migration or backup tooling knew about.
3. Process-wide singleton lock — only ONE VectorDb instance could
exist per process. Subsequent constructors threw "Database error:
Database already open. Cannot acquire lock."
4. NAPI dispose did not synchronously release the redb lock — root
cause of v3.9.5's futex deadlock.
NativeHnswBackend was rewritten to wrap hnswlib-node@^3.0.0 (the
canonical Yury Malkov C++ Hnswlib reference implementation, used by
Pinecone, Weaviate, Qdrant, LangChain, ChromaDB). All four bugs are
gone in one swap. Empirical verification: 100% recall@10 vs the old
10%, faster inserts, multiple instances coexist, no CWD pollution.
useNativeHNSW default is flipped back from false to true (reverting
the v3.9.5 hotfix). Users with large codebases get sublinear HNSW
search by default again.
aqe init now warns when it detects a stale `vectors.db` from the
previous version and suggests `rm vectors.db`. It does NOT auto-delete
(per the data protection rules).
No new dependency was added — hnswlib-node was already in package.json.
Bumps fleetVersion in skills-manifest.json from 3.9.2 (stale) to
3.9.6 to match.
Adds release notes at docs/releases/v3.9.6.md and updates the
release index.
Closes #399. Closes #396 (test-suite cleanup carried over from the
closed PR #403, also in this release).
See ADR-090 for the full decision record and CHANGELOG.md for the
user-facing summary.
Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
Release Notes
All Agentic QE release notes organized by version.
| Version | Date | Highlights |
|---|---|---|
| v3.9.6 | 2026-04-06 | Native HNSW works again — replaced @ruvector/router with hnswlib-node, no more vectors.db cruft |
| v3.9.5 | 2026-04-06 | Root-cause fix: disable native HNSW (deadlocks on certain inputs), faster JS backend by default |
| v3.9.4 | 2026-04-06 | Hotfix: governance phase chunk-split regression, --skip-code-index escape hatch, per-file logging |
| v3.9.3 | 2026-04-06 | Proper fix: aqe init watchdog, lazy bootstrap, remove daemon spawn, MCP entry regression |
| v3.9.2 | 2026-04-06 | Hotfix: aqe init --auto RVF lock deadlock, CLI exit hang |
| v3.9.1 | 2026-04-05 | RVF persistent vectors, agent COW branching, HNSW unification, StrongDM |
| v3.9.0 | 2026-04-02 | 11 CC-internals improvements, 4-tier compaction, plugin system, QE daemon |
| v3.8.14 | 2026-03-31 | SQL injection fix, remove faker from generators (~6 MB), 3 P0 blockers resolved |
| v3.8.13 | 2026-03-30 | Code intelligence CLI (complexity, --incremental, --git-since), security fix, doc cleanup |
| v3.8.12 | 2026-03-29 | RuVector Phase 5: pattern intelligence, graph learning, scale optimization |
| v3.8.11 | 2026-03-27 | YAML pipelines, heartbeat CLI, economic routing, session cache (Tier 3) |
| v3.8.10 | 2026-03-26 | Fix coverage data pipeline — eliminate fabricated scores, unify key ecosystem |
| v3.8.9 | 2026-03-25 | Multi-language coverage parsers, SHA-256 witness security, P1 scale benchmarks |
| v3.8.8 | 2026-03-24 | MCP-free agents, aqe memory CLI, WASM parsers, skill description improvements |
| v3.8.7 | 2026-03-23 | Unified hypergraph persistence, CLI/MCP query tools, code index extractor |
| v3.8.6 | 2026-03-23 | Security ReDoS fixes, flaky timer elimination, module decomposition |
| v3.8.5 | 2026-03-21 | Both P1 items resolved, structured logging, hooks decomposition, test stability |
| v3.8.4 | 2026-03-19 | P0 security fixes, DB corruption repair, 30-40% smaller bundles, CI parallelization |
| v3.8.3 | 2026-03-18 | ADR-086 skill overhaul (84 skills), 5 new skills, 7 bug fixes |
| v3.8.2 | 2026-03-17 | 8 bug fixes from user testing, validation pipeline helper, ruflo rebrand |
| v3.8.1 | 2026-03-17 | Fix MCP tool prefix mismatch in 8 agent files, permission pattern fix |
| v3.8.0 | 2026-03-16 | RuVector: native HNSW (150x faster), neural routing, coherence safety gates |
| v3.7.22 | 2026-03-14 | Hook path resolution fix, SQLite corruption prevention, v2 migration removal |
| v3.7.21 | 2026-03-13 | Agent dependency intelligence, shell injection fixes, semgrep parallel SAST |
| v3.7.20 | 2026-03-12 | Fix duplicate brain-checkpoint hooks and governance time budget blocking tools |
| v3.7.19 | 2026-03-12 | YAML pipelines, validation pipeline, cross-phase signals, heartbeat scheduler, context sources |
| v3.7.18 | 2026-03-11 | Hotfix: agents not installed on aqe init --auto upgrade |
| v3.7.17 | 2026-03-11 | BMAD-inspired: adversarial review, agent overlays, validation pipelines, branch enumerator |
| v3.7.16 | 2026-03-10 | Critical: test DB isolation fix, Tier 3 baselines, MCP persistence pipeline |
| v3.7.15 | 2026-03-09 | Six Hats learning improvements, Proof-of-Quality CLI, MCP tool scoping, test stability |
| v3.7.14 | 2026-03-08 | Brain export v3.0 (25 tables), witness chain v3, streaming, npm packaging fix |
| v3.7.13 | 2026-03-07 | Trigger optimizer, version comparator, skill intent classification |
| v3.7.12 | 2026-03-06 | Fix CLI crash on global install (lazy-load typescript), release verification hardening |
| v3.7.11 | 2026-03-06 | Full @claude-flow/guidance governance integration across all 8 modules |
| v3.7.10 | 2026-03-05 | Fix MCP path resolution, CRLF skill parsing, stale v3/ refs; README rewrite |
| v3.7.9 | 2026-03-05 | Multi-language test gen (8 langs), 384-dim embedding standardization, trust tier evals |
| v3.7.8 | 2026-03-04 | Loki-Mode: 7 adversarial quality gates (anti-sycophancy, test gates, EMA, auto-escalation) |
| v3.7.7 | 2026-03-02 | Scrapling-inspired browser: adaptive locators, resource blocking, stealth client, page pool |
| v3.7.6 | 2026-03-02 | 30 MCP tools wired, 9 security fixes, dependency cleanup, dead code removal |
| v3.7.5 | 2026-03-01 | Flat project structure, RVF binary brain export, native module crash fix |
| v3.7.4 | 2026-02-28 | 8 new platform integrations (Copilot, Cursor, Cline, Kilo, Roo, Codex, Windsurf, Continue.dev), 202 new tests |
| v3.7.3 | 2026-02-27 | 17 bug fixes (Phase 0), CI-native exit codes, Phase 1 complete |
| v3.7.2 | 2026-02-25 | AWS Kiro IDE integration, hono security patch |
| v3.7.1 | 2026-02-24 | OpenCode integration, RVF production wiring, 8 bug fixes |
| v3.7.0 | 2026-02-23 | RVF Cognitive Container integration: MinCut routing, witness chain, brain CLI, HNSW unification |
| v3.6.19 | 2026-02-22 | 6 learning pipeline fixes, event-driven trajectories, 25 new tests |
| v3.6.18 | 2026-02-21 | 6 new Agent Teams MCP tools, auto-team-wiring, team enriched responses |
| v3.6.17 | 2026-02-21 | QE Queen Coordinator 7 fixes, HNSW semantic search, hierarchical topology |
| v3.6.16 | 2026-02-21 | Node.js node:test generator, smart assertions, 12 bug fixes |
| v3.6.15 | 2026-02-20 | Fix 11 test generation bugs (#295), fix cloud sync pg loading |
| v3.6.14 | 2026-02-20 | Fix test OOM crashes, CI artifact upload, flaky test stabilization |
| v3.6.13 | 2026-02-19 | Fix test stubs, MCP crash, vector mismatch, coverage, security scan |
| v3.6.12 | 2026-02-19 | Fix HNSW crash, real security scanning, hooks directory, 5 issues fixed |
| v3.6.11 | 2026-02-18 | MCP stability, multi-language support, smart init merge, 9 issues fixed |
| v3.6.10 | 2026-02-18 | QCSD Production Telemetry, eval-driven workflow, KG test generation |
| v3.6.9 | 2026-02-17 | Code quality overhaul, self-learning feedback loop, P0 security fixes |
| v3.6.8 | 2026-02-15 | MCP auto-init fleet, unified experience persistence, fix #262 |
| v3.6.7 | 2026-02-14 | Fix DB corruption, remove VACUUM, eliminate dual-DB split-brain |
| v3.6.6 | 2026-02-13 | Fix Node 22+ crash, restore self-learning hooks, single-DB resolution |
| v3.6.5 | 2026-02-13 | Fix fleet_init dimension mismatch (#255), agent asset sync, README fixes |
| v3.6.4 | 2026-02-12 | Security hardening, Dream Scheduler, QE pattern seeding, delta scanning |
| v3.6.3 | 2026-02-11 | QX Analysis, SFDIPOT product factors, cross-platform compatibility |
| v3.6.2 | 2026-02-10 | Init stability fixes (YAML parser, agent helper file placement) |
| v3.6.1 | 2026-02-09 | Agent Teams Integration, Distributed Tracing, Dynamic Scaling |
| v3.6.0 | 2026-02-08 | Enterprise Integration Domain, 8 new agents, Pentest Validation |
| v3.5.0 | 2026-02-04 | Governance by default, QCSD 2.0 Lifecycle, Self-Healing Enterprise |
| v3.4.2 | 2026-02-02 | Skill Validation System, Trust Tiers |
| v3.4.0 | 2026-02-01 | AG-UI, A2A, A2UI Protocols |
For the full changelog with all minor and patch versions, see v3/CHANGELOG.md.