Remove the nested v3/ subdirectory by moving all active source code, tests, configs, and assets directly to the project root. Archive v2/ (dead code, 847MB) to v2-archive.tar.gz. Key changes: - Move v3/src/ → src/, v3/tests/ → tests/, v3/packages/ → packages/ - Move v3/tsconfig.json, v3/vitest.config.ts to root - Merge v3/package.json into root package.json (ESM, scripts, deps, exports) - Merge v3/scripts/ into scripts/, v3/implementation/ into docs/implementation/ - Update all CI workflows to remove "cd v3 &&" and v3/ path prefixes - Fix all init installer path resolution (3-level-up → 2-level-up) - Fix hooks to use "node ./dist/cli/bundle.js" instead of bare "aqe" - Update settings.json ADR/DDD directories to docs/implementation/ - Fix helper scripts (statusline, adr-compliance, ddd-tracker, guidance-hooks) - Update 58 agent definitions: aqe/v3/ → aqe/ memory namespaces - Update 15 guidance shards: v3/src/ → src/ path references - Fix sync interfaces: remove v3/ and v2/ path references - Fix test path calculations (process.cwd() + '..' no longer needed) - Fix flaky perf test threshold (500ms → 1000ms for CI environments) - Fix complexity-analyzer test to match ADR-051 keyword-based eligibility Build passes, 17,901 tests pass, CLI and MCP bundles verified. Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
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Code Intelligence Domain
Bounded Context Overview
Domain: Code Intelligence
Responsibility: Knowledge Graph construction, semantic search, and impact analysis
Location: src/domains/code-intelligence/
The Code Intelligence domain builds and maintains a Knowledge Graph of the codebase, enabling O(log n) semantic search via HNSW indexing and accurate change impact analysis.
Ubiquitous Language
| Term | Definition |
|---|---|
| Knowledge Graph | Graph representation of code relationships |
| Semantic Search | Natural language code search |
| Impact Analysis | Determining affected code from changes |
| Dependency Map | Graph of code dependencies |
| Index | Searchable representation of codebase |
| KG Node | Entity in the Knowledge Graph |
| KG Edge | Relationship between nodes |
Domain Model
Aggregates
IndexResult (Aggregate Root)
Result of codebase indexing operation.
interface IndexResult {
filesIndexed: number;
nodesCreated: number;
edgesCreated: number;
duration: number;
errors: IndexError[];
}
ImpactAnalysis (Aggregate Root)
Complete change impact assessment.
interface ImpactAnalysis {
directImpact: ImpactedFile[];
transitiveImpact: ImpactedFile[];
impactedTests: string[];
riskLevel: Severity;
recommendations: string[];
}
Entities
DependencyNode
Node in the dependency graph.
interface DependencyNode {
id: string;
path: string;
type: 'module' | 'class' | 'function' | 'file';
inDegree: number;
outDegree: number;
}
KGNode
Entity in the Knowledge Graph.
interface KGNode {
id: string;
label: string;
properties: Record<string, unknown>;
}
SearchResult
Individual search match.
interface SearchResult {
file: string;
line?: number;
snippet: string;
score: number;
highlights: string[];
metadata?: Record<string, unknown>;
}
Value Objects
ImpactedFile
Immutable representation of affected file.
interface ImpactedFile {
readonly file: string;
readonly reason: string;
readonly distance: number; // Graph distance from change
readonly riskScore: number;
}
DependencyEdge
Immutable dependency relationship.
interface DependencyEdge {
readonly source: string;
readonly target: string;
readonly type: 'import' | 'call' | 'extends' | 'implements';
}
DependencyMetrics
Aggregate dependency statistics.
interface DependencyMetrics {
readonly totalNodes: number;
readonly totalEdges: number;
readonly avgDegree: number;
readonly maxDepth: number;
readonly cyclomaticComplexity: number;
}
SearchFilter
Search constraint specification.
interface SearchFilter {
readonly field: string;
readonly operator: 'eq' | 'contains' | 'gt' | 'lt';
readonly value: unknown;
}
Domain Services
CodeIntelligenceAPI
Primary API for the domain.
interface CodeIntelligenceAPI {
index(request: IndexRequest): Promise<Result<IndexResult, Error>>;
search(request: SearchRequest): Promise<Result<SearchResults, Error>>;
analyzeImpact(request: ImpactRequest): Promise<Result<ImpactAnalysis, Error>>;
mapDependencies(request: DependencyRequest): Promise<Result<DependencyMap, Error>>;
queryKG(request: KGQueryRequest): Promise<Result<KGQueryResult, Error>>;
}
Domain Events
| Event | Trigger | Payload |
|---|---|---|
IndexCompletedEvent |
Indexing finished | { filesIndexed, nodesCreated, edgesCreated } |
ImpactAnalyzedEvent |
Impact analysis done | { changedFiles, impactedFiles, riskLevel } |
CycleDetectedEvent |
Dependency cycle found | { cycle, severity } |
HotspotIdentifiedEvent |
High-coupling node found | { node, inDegree, outDegree } |
Knowledge Graph Schema
Node Types
| Type | Properties | Description |
|---|---|---|
File |
path, language, size, lastModified |
Source file |
Module |
name, path, exports |
ES/CJS module |
Class |
name, file, methods, properties |
Class definition |
Function |
name, file, params, async, exported |
Function definition |
Interface |
name, file, properties |
TypeScript interface |
Test |
name, file, type, assertions |
Test case |
Edge Types
| Type | From | To | Description |
|---|---|---|---|
IMPORTS |
Module | Module | Import relationship |
CALLS |
Function | Function | Function call |
EXTENDS |
Class | Class | Inheritance |
IMPLEMENTS |
Class | Interface | Implementation |
TESTS |
Test | Function/Class | Test target |
CONTAINS |
File | Class/Function | File contents |
Search Capabilities
Search Types
| Type | Use Case | Algorithm |
|---|---|---|
semantic |
Natural language queries | HNSW + embeddings |
exact |
Precise string match | Inverted index |
fuzzy |
Approximate match | Levenshtein distance |
Query Examples
// Semantic search
const results = await api.search({
query: "function that handles user authentication",
type: 'semantic',
limit: 10,
});
// Exact search with filters
const results = await api.search({
query: "handleLogin",
type: 'exact',
filters: [
{ field: 'language', operator: 'eq', value: 'typescript' },
{ field: 'type', operator: 'eq', value: 'function' },
],
});
// Knowledge Graph query (Cypher)
const results = await api.queryKG({
query: "MATCH (f:Function)-[:CALLS]->(g:Function) WHERE f.name = 'processOrder' RETURN g",
type: 'cypher',
});
// Natural language KG query
const results = await api.queryKG({
query: "What functions call the authentication service?",
type: 'natural-language',
});
Context Integration
Upstream Dependencies
- AST parsers (ts-morph, babel, tree-sitter)
- Embedding models (transformers)
Downstream Consumers
- Test Generation: Import paths, function signatures
- Coverage Analysis: File complexity
- Defect Intelligence: Dependency analysis
- All Domains: Semantic code search
Anti-Corruption Layer
The domain abstracts different languages through language-specific AST parsers, exposing a unified Knowledge Graph interface.
Task Handlers
| Task Type | Handler | Description |
|---|---|---|
index-codebase |
index() |
Build/update Knowledge Graph |
semantic-search |
search() |
O(log n) code search |
analyze-impact |
analyzeImpact() |
Change impact analysis |
map-dependencies |
mapDependencies() |
Dependency graph |
query-kg |
queryKG() |
Knowledge Graph queries |
Impact Analysis Algorithm
async function analyzeImpact(changedFiles: string[], depth: number): Promise<ImpactAnalysis> {
const directImpact: ImpactedFile[] = [];
const transitiveImpact: ImpactedFile[] = [];
const visited = new Set<string>();
// BFS to find impacted files
const queue: Array<{ file: string; distance: number }> =
changedFiles.map(f => ({ file: f, distance: 0 }));
while (queue.length > 0) {
const { file, distance } = queue.shift()!;
if (visited.has(file) || distance > depth) continue;
visited.add(file);
const dependents = await getDependents(file);
for (const dependent of dependents) {
const impact: ImpactedFile = {
file: dependent,
reason: `Depends on ${file}`,
distance: distance + 1,
riskScore: calculateRiskScore(dependent, distance + 1),
};
if (distance === 0) {
directImpact.push(impact);
} else {
transitiveImpact.push(impact);
}
queue.push({ file: dependent, distance: distance + 1 });
}
}
return {
directImpact,
transitiveImpact,
impactedTests: await findImpactedTests(visited),
riskLevel: calculateOverallRisk(directImpact, transitiveImpact),
recommendations: generateRecommendations(directImpact, transitiveImpact),
};
}
ADR References
- ADR-006: Unified Memory Service (KG storage)
- ADR-009: Hybrid Memory Backend (HNSW indexing)