Files
Dragan Spiridonov c2f973e792 feat: add CLI code intelligence commands (complexity, --incremental, --git-since) and fix stale references
- Add `aqe code complexity` action with cyclomatic/cognitive/Halstead metrics, hotspot detection, batched concurrency
- Add `--incremental` and `--git-since <ref>` flags for `aqe code index`
- Fix command injection vulnerability: replace execSync with execFileSync (CWE-78)
- Fix missing return after cleanupAndExit in complexity action
- Add --depth NaN validation
- Import shared SOURCE_EXTENSIONS instead of duplicating inline
- Fix stale `aqe kg` commands in SKILL.md Quick Start/CLI Examples across .claude/, assets/, .kiro/
- Fix phantom agent names (qe-knowledge-graph, qe-semantic-searcher) in skills, evals, and catalog
- Fix `ruflo doctor --fix` references in CLAUDE.md, skill gotchas, and docs → `aqe health`/`aqe init`
- Fix `aqe code-intelligence index` → `aqe code index .` in fleet integration guide
- Add code intelligence CLI section to README.md
- Fix tool-scoping test: add hypergraph_query to all 5 scoped roles
- Fix queen-dependency test: correct expectation for agents without inline mcp__ refs

Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
2026-03-30 09:57:49 +00:00
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