* feat: implement ADR-062 (StrongDM all 3 tiers) and ADR-087 (RuVector 14/14 capabilities)
ADR-062 StrongDM Software Factory — all 6 actions across 3 tiers:
- Tier 1: Loop detection wired to MCP protocol-server (blocks on strike 3+),
token dashboard (pre-existing)
- Tier 2: Holdout testing (10% FNV-1a selection, filtered in test-execution),
gate ratcheting (monotonic 5-pass/2%/95% cap, persisted to MemoryBackend)
- Tier 3: Progressive context (TF-IDF prediction, reduces availableFiles on spawn),
meta-learning cycle (4 insight types, stored + published as domain events)
ADR-087 RuVector Advanced Capabilities — milestones 1-5:
- EWC++ recordOutcome + backgroundConsolidate wired to 3 domain coordinators
- R1: HDC fingerprinting (10K-bit hypervectors, wired to PatternStore.store())
- R3: Delta event sourcing (sparse encoding, wired to PatternStore.store())
- R13: Cognitive routing (predictive compression, wired to mailbox.send/receive)
- R14: Hyperbolic HNSW (Poincare ball, auto-indexed in PatternStore.store())
Also updates ADR statuses: 059, 060, 061 → Implemented (were already done),
062 → Implemented, 086 → In Progress, 087 → Implemented.
223 new tests across 11 test files, all passing. Zero regressions.
Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
* feat: implement RVF cluster (ADR-065/066/067/071) with native benchmarks
Implements the RVF persistence cluster for persistent HNSW vector storage,
agent memory branching, and HNSW unification foundation.
Key changes:
- RvfPatternStore: IPatternStore backed by @ruvector/rvf-node native HNSW
(1.2ms cold-start, 0.19ms search p50, verified with real native binary)
- AgentMemoryBranch: per-agent COW isolation via derive(), ingest-log merge,
wired into Kernel.initialize() + DefaultAgentCoordinator
- HnswLegacyBridge: adapts old IHNSWIndex to unified IHnswIndexProvider,
wired into PatternStore when useUnifiedHnsw flag enabled
- Factory routing: createPatternStore() returns RvfPatternStore when flag
enabled + native available + data directory exists
- Dream engine: accepts external RVF adapter (no duplicate file handles),
RVCOWBranchManager enhanced with recall validation check
- @ruvector/gnn bumped 0.1.19→0.1.25, 3 new feature flags added
- IPatternStore interface extracted for polymorphic pattern store usage
- 50 new tests (16 RvfPatternStore + 17 AgentMemoryBranch + 12 bridge + 5 benchmarks)
- 1188 tests pass, 0 regressions
ADR status: 066 Implemented, 067 Implemented, 065 Implemented,
069/071 In Progress (honest assessment after brutal-honesty review)
Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
* fix(init): resolve skills/agents paths from package root, not relative to bundle depth
esbuild code-splitting puts installer code into dist/cli/chunks/ (3 levels
deep) instead of dist/init/ (2 levels deep), so the old ../../ traversals
landed at dist/ instead of the package root — causing "Source directory not
found" errors for all global installs.
Replace brittle relative-path resolution in all 4 installers with a shared
findPackageRoot() that walks up to the nearest package.json with
name=agentic-qe. Prioritise assets/ paths (canonical npm source) over
.claude/ paths.
Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
* feat: complete RVF cluster Phases 2-3 (ADR-067/069/071/072) with devil's advocate fixes
Phase 2A (ADR-067): Agent memory branching enabled — useAgentMemoryBranching=true,
BRANCH_DISCARD witness action, recordIngest callback exposed to agents via config.
Phase 2B (ADR-069): Dream RVF COW — useRvfFork driven by isRVFPatternStoreEnabled(),
child adapter stored + temp files cleaned up on merge/discard, 13 tests.
Phase 2C (ADR-071): HNSW unification — useUnifiedHnsw=true, HNSWEmbeddingIndex routes
through HnswAdapter, UnifiedMemory vectorIndex uses UnifiedHnswIndex, HnswLegacyBridge
delegates to adapter string-ID APIs (no duplicate ID maps), addEmbeddingsBatch routed
correctly, saveIndex/loadIndex safe under unified mode.
Phase 3 (ADR-072): RVF primary migration scaffolding — RvfMigrationAdapter (5-stage
routing with write latency tracking), RvfConsistencyValidator (rolling divergence +
compaction), RvfStageGate (go/no-go with witness chain), rvfMigrationStage=1 default,
wired into shared-rvf-dual-writer at stage >= 2, 32 tests.
Cross-cutting fixes from devil's advocate review:
- Shared RVF adapter singleton eliminates dual file handles (kernel + dream engine)
- RvfPatternStore reports honest nativeAvailable=false + rvfInitError on failure
- ESM-safe dynamic import() replaces require() in dream-engine and branch-manager
- quality_assess defaults to src/ instead of cwd to prevent full-project scan hang
- discoverSourceFiles skips .agentic-qe/.claude/.cache dirs, adds maxFiles=5000 cap
Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
* feat: complete RVF cluster plan — Phase 2C decommission, Phase 3 integration, fix 7 pre-existing test failures
Phase 2C (ADR-071) — HNSW decommission:
- Remove RuvectorFlatIndex fallback from unified-memory.ts; always use UnifiedHnswIndex
- Hardcode isUnifiedHnswActive()=true in HNSWEmbeddingIndex (hnswlib-node legacy path is dead code)
- Create HnswShadowValidator for brute-force vs HnswAdapter divergence validation
- Benchmark alias (rvf-pattern-store.bench.ts) for plan compliance
Phase 3 (ADR-072) — RVF Primary Migration integration:
- RvfMigrationCoordinator: wires adapter + validator + gate with real SQLite/RVF handles
- MCP tools: migration_status, migration_check, migration_promote (persistence category)
- Kernel boot wiring: coordinator initializes when rvfMigrationStage >= 2
- RvfMigrationAdapter.setStage(): propagate promotions to routing logic
- Promote default rvfMigrationStage from 1 (hybrid) to 2 (dual-write-sqlite-primary)
- Integration test: 13 tests covering full lifecycle (stage 1→2→3→4), write/read routing,
consistency checks, gate enforcement, fallback, metrics
Test fixes (7 pre-existing failures → 1 remaining):
- code-intelligence-metrics-wiring: spy console.info not console.log (logger routes to console.info)
- mcp-integration: disable ADR-062 loop detection (repeated identical calls are by design)
- dream-cycle-tool (2 tests): RvfPatternStore empty-query branch returns all patterns from SQLite
- coherence-integration (4 tests): RvfPatternStore vector search fallback computes brute-force
cosine over SQLite embeddings when RVF adapter unavailable; getStats() falls back to SQLite count;
auto-attach SQLitePatternStore in initialize() when not explicitly wired
Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
* chore(release): bump version to v3.9.1
- Version bump in package.json and skills-manifest.json
- Fix "Dynamic require of X is not supported" in ESM bundles by adding
createRequire banner to both CLI and MCP build scripts — every chunk
now has a working require() for Node.js builtins
- Add CHANGELOG.md entry and release notes for v3.9.1
Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
* fix(ci): regenerate package-lock.json for npm ci compatibility
The lock file was out of sync with package.json — new transitive
dependencies added on main were missing. All 15 CI checks failed
at `npm ci` with "Missing from lock file" errors.
Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
* fix(ci): pin Node to 24.13.0 and restore working lock file
Node 24.14.1 ships npm 11.11.0 which enforces stricter lock file
validation than 11.6.x (what 24.13.0 ships). The existing lock file
passes under 11.6.x but fails under 11.11.0 with "Missing from lock
file" for transitive dependencies of private-registry packages.
Pin all 5 workflow files to node-version: '24.13.0' and restore the
lock file from commit f9b76968 (last CI-passing state) with only the
version bump to 3.9.1.
Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
* fix(ci): regenerate package-lock.json with npm 10 for stable npm ci
npm 11 (Node 24) produces internally inconsistent lock files that npm ci
rejects — each npm install resolves transitive deps differently. Generated
with npm 10 (Node 22 LTS) which produces stable lock files compatible with
both npm 10 and npm 11.
Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
---------
Co-authored-by: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
Convert heavy top-level imports (kernel, coordination, workers, unified-memory)
to dynamic imports deferred until command execution. Extract workflow command
into src/cli/commands/workflow.ts, add lazy-registry for on-demand handler
loading, and enable esbuild splitting with chunk output. Reduces CLI startup
cost by avoiding eager module resolution for unused commands.
Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
Integrate tree-sitter WASM as the default parser for 5 languages, replacing
regex-only parsing (~97-98%) with AST-based parsing (~100% accuracy).
- Add TreeSitterWASMParser implementing ILanguageParser for 5 languages
- Bundle only needed WASM grammars in assets/grammars/ (8.5MB vs 50MB)
- Add FallbackParser with 3-retry logic before permanent regex degradation
- Add per-call parser instances to prevent concurrency races across await
- Add cyclomatic complexity computation from AST branching nodes
- Add property extraction from class/struct AST nodes
- Add AQE_PARSER_REGEX_ONLY=1 env var for opt-out to regex
- Replace require() with ESM-compatible dynamic import() in registry
- Mark web-tree-sitter as external in CLI/MCP esbuild configs
- Amend ADR-076 with decision rationale and alternatives evaluated
Alternatives evaluated and rejected:
- @ast-grep/napi: npm package only ships JS/TS/CSS/HTML, others need native .so
- node-tree-sitter: requires native C compilation via node-gyp
Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com>
TypeScript was an external ESM dependency loaded at bundle startup,
crashing `aqe --version` when typescript isn't installed (global
installs). Now lazy-loaded via createRequire Proxy — only triggers
when AST parsing features are used.
Also adds isolated install verification to /release skill (steps 8e
and 15) to catch missing externals before they reach users.
Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
package.json has "type": "module" so .js files are treated as ESM.
Scripts using require() renamed to .cjs, scripts using import to .mjs.
Fixes Test Dashboard CI failure.
Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
Dragan Spiridonov