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Shanghua
49 lines
1.2 KiB
ReStructuredText
49 lines
1.2 KiB
ReStructuredText
Reactome Tools
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==============
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**Configuration File**: ``reactome_tools.json``
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**Tool Type**: Local
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**Tools Count**: 1
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This page contains all tools defined in the ``reactome_tools.json`` configuration file.
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Available Tools
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---------------
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**Reactome_get_pathway_reactions** (Type: ReactomeRESTTool)
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~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
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Query all Reactions contained under a Pathway using Pathway Stable ID. This is currently the only...
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.. dropdown:: Reactome_get_pathway_reactions tool specification
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**Tool Information:**
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* **Name**: ``Reactome_get_pathway_reactions``
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* **Type**: ``ReactomeRESTTool``
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* **Description**: Query all Reactions contained under a Pathway using Pathway Stable ID. This is currently the only working Reactome tool.
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**Parameters:**
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* ``stId`` (string) (required)
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Pathway Stable ID, e.g., 'R-HSA-73817' (verified valid).
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**Example Usage:**
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.. code-block:: python
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query = {
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"name": "Reactome_get_pathway_reactions",
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"arguments": {
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"stId": "example_value"
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}
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}
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result = tu.run(query)
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Navigation
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----------
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* :doc:`tools_config_index` - Back to Tools Overview
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* :doc:`../guide/loading_tools` - Loading Local Tools
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