Safi 4563b043f2 Fix 6 bugs: ID collisions, path portability, alias resolution, HTML controls, desync guard, rationale prompt ...

- #550: _file_stem() includes parent dir to prevent node ID collisions for same-named files
- #555: extract() relativizes source_file paths before returning for cross-machine portability
- #562: to_json() returns bool; _rebuild_code() writes report/html only if json succeeded
- #563: skill prompts store rationale as node attribute, not separate node; enforce calls direction
- #566: Show All / Hide All buttons added to HTML community panel
- #575: _import_js() resolves tsconfig.json compilerOptions.paths aliases before external fallback

Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>

2026-04-27 21:44:22 +01:00

..

__init__.py

Add --wiki export: agent-crawlable knowledge wiki from graph

2026-04-06 16:06:31 +01:00

__main__.py

feat: cross-repo merge-graphs; fix #527 CLAUDE_CONFIG_DIR; fix #524 graphify-out excluded from source scan

2026-04-23 19:59:14 +01:00

analyze.py

fix: deterministic GRAPH_REPORT on large graphs, stable edge node IDs, correct common-root inference

2026-04-22 09:04:38 +01:00

benchmark.py

cherry-pick PRs #212, #220, #204, #221 into 0.4.2

2026-04-11 21:07:39 +01:00

build.py

fix #479 #451: build_merge(), pre-write shrink guard, label dedup, chunk-suffix prompt block

2026-04-23 20:04:43 +01:00

cache.py

Fix four bugs from community PRs

2026-04-21 22:26:17 +01:00

cluster.py

release 0.3.25: Aider + Copilot CLI, directed graphs, frontmatter cache, graphifyignore parent discovery, MCP fixes

2026-04-10 00:56:22 +01:00

detect.py

feat: cross-repo merge-graphs; fix #527 CLAUDE_CONFIG_DIR; fix #524 graphify-out excluded from source scan

2026-04-23 19:59:14 +01:00

export.py

Fix 6 bugs: ID collisions, path portability, alias resolution, HTML controls, desync guard, rationale prompt

2026-04-27 21:44:22 +01:00

extract.py

Fix 6 bugs: ID collisions, path portability, alias resolution, HTML controls, desync guard, rationale prompt

2026-04-27 21:44:22 +01:00

hooks.py

fix #547 #559 #570: expand ~ in hooksPath, fix gitignore inline comments, nosec on write sinks

2026-04-27 21:27:26 +01:00

ingest.py

Security: fix YAML injection in ingest.py, </script> injection in export.py, bound collision loop

2026-04-10 16:07:51 +01:00

manifest.py

perf+fix: parallel extraction, faster imports, bug fixes

2026-04-04 18:56:38 +01:00

report.py

fix(report): complete empty-community fix — hubs, summary count, thin-community gaps; add graph-query CLI rules to install sections

2026-04-21 22:42:53 +01:00

security.py

fix #455 #448 IsADirectoryError in file_hash and save_semantic_cache, fix #454 sanitize_label crash on None source_file

2026-04-21 21:25:13 +01:00

serve.py

v0.4.15: VS Code Copilot Chat, OpenCode/Gemini Windows fixes, .mjs/.ejs, macOS watch, god_nodes degree rename

2026-04-15 23:08:43 +01:00

skill-aider.md

Fix 6 bugs: ID collisions, path portability, alias resolution, HTML controls, desync guard, rationale prompt

2026-04-27 21:44:22 +01:00

skill-claw.md

Fix 6 bugs: ID collisions, path portability, alias resolution, HTML controls, desync guard, rationale prompt

2026-04-27 21:44:22 +01:00

skill-codex.md

Fix 6 bugs: ID collisions, path portability, alias resolution, HTML controls, desync guard, rationale prompt

2026-04-27 21:44:22 +01:00

skill-copilot.md

Fix 6 bugs: ID collisions, path portability, alias resolution, HTML controls, desync guard, rationale prompt

2026-04-27 21:44:22 +01:00

skill-droid.md

Fix 6 bugs: ID collisions, path portability, alias resolution, HTML controls, desync guard, rationale prompt

2026-04-27 21:44:22 +01:00

skill-kiro.md

Fix 6 bugs: ID collisions, path portability, alias resolution, HTML controls, desync guard, rationale prompt

2026-04-27 21:44:22 +01:00

skill-opencode.md

Fix 6 bugs: ID collisions, path portability, alias resolution, HTML controls, desync guard, rationale prompt

2026-04-27 21:44:22 +01:00

skill-trae.md

Fix 6 bugs: ID collisions, path portability, alias resolution, HTML controls, desync guard, rationale prompt

2026-04-27 21:44:22 +01:00

skill-vscode.md

v0.4.15: VS Code Copilot Chat, OpenCode/Gemini Windows fixes, .mjs/.ejs, macOS watch, god_nodes degree rename

2026-04-15 23:08:43 +01:00

skill-windows.md

Fix 6 bugs: ID collisions, path portability, alias resolution, HTML controls, desync guard, rationale prompt

2026-04-27 21:44:22 +01:00

skill.md

Fix 6 bugs: ID collisions, path portability, alias resolution, HTML controls, desync guard, rationale prompt

2026-04-27 21:44:22 +01:00

transcribe.py

Remove Anthropic API call from transcribe.py - agent generates Whisper prompt itself

2026-04-10 15:55:22 +01:00

validate.py

cherry-pick PRs #212, #220, #204, #221 into 0.4.2

2026-04-11 21:07:39 +01:00

watch.py

Fix 6 bugs: ID collisions, path portability, alias resolution, HTML controls, desync guard, rationale prompt

2026-04-27 21:44:22 +01:00

wiki.py

fix: wiki encoding+collisions, hook rebase guard, detect path resolve, readme gitignore docs

2026-04-22 06:26:15 +01:00