#1174: affected.py load_graph now forces directed=True before
node_link_graph, matching the identical fix in serve.py and __main__.py.
Undirected graphs (directed:false in graph.json) were causing in_edges
to fall back to a direction-blind scan, missing true callers and
reporting false positives. Regression test added.
#1173: post-commit and post-checkout hook bodies now read
graphify-out/.graphify_root before calling _rebuild_code, falling back
to Path('.') if absent. A scoped build (graphify src/) no longer gets
silently expanded to the full repo on the next commit. Tests added.
#1172: Step 9 cleanup split into rm -f for fixed files and
find -maxdepth 1 -delete for the chunk glob. Under fish/zsh an
unmatched glob aborts the entire rm -f line, leaving temp files on disk.
Fixed in the three skillgen source fragments and regenerated.
#1163: detect_incremental type guard on stored mtime — if the manifest
contains a dict-valued mtime (schema drift from older versions), coerce
to None rather than propagating a non-numeric into comparisons.
Regression test added.
Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
All-platform progressive-disclosure skill split + generator (addresses #1106).
Splits each platform's skill into a lean core (~615 lines, full default pipeline inline) + on-demand references/, generated from a single source via tools/skillgen with a CI/pre-commit drift gate. 13 hosts split, aider/devin stay monoliths. Also fixes the stale bare-path bugs across the previously hand-maintained variants and moves the always-on blocks into packaged markdown.
Verified: all 5 generator guards pass, byte-verbatim load-bearing slices, lean cores self-sufficient on the default path across all 13 split hosts, references gated to non-default branches, description preserves the graphify-out-query-first clause. Supersedes #1119 (Claude-first subset).
Known follow-up applied on top: harden _always_on() against a missing packaged file so a partial install can't brick the CLI.
#796: add edge_data()/edge_datas() helpers in build.py that tolerate
MultiGraph/MultiDiGraph; replace all G.edges[u,v] 2-tuple call sites in
__main__.py, serve.py, wiki.py, export.py, analyze.py, benchmark.py;
fix same pattern in 10 skill file inline heredocs
#795: all 12 skill files now short-circuit on /graphify --help or -h
and print the Usage block without running any pipeline steps
#792 (hollow response): add _response_is_hollow() predicate in llm.py;
when Ollama (or any backend) returns empty/null/whitespace content or a
parsed result with no nodes/edges, rewrite finish_reason="length" so
_extract_with_adaptive_retry bisects the chunk instead of silently
dropping it; applied to _call_openai_compat, _call_claude, _call_bedrock
Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
10 skill-*.md files had descriptions that only described what graphify does (input->pipeline->output), not when agents should use it. This meant skills never loaded proactively on codebase questions.
Changed to hybrid descriptions that retain the pipeline summary but add trigger conditions: 'Use when user asks any question about a codebase, project content, architecture, or file relationships'.
#655 and #656 already fixed in cache.py and security.py.
#657: add rationale to file_type schema in all 12 skill variants; warn against inventing concept.
#658: add explicit chunk-merge step with token summation before save_semantic_cache.
Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
Safi