mirror of
https://github.com/bytedance/deer-flow.git
synced 2026-09-14 19:42:02 +08:00
rayhpeng/hexagonal-scheduling-slice
19 Commits
| Author | SHA1 | Message | Date | |
|---|---|---|---|---|
 Vanzeren
|
c48de5e70b |
feat(checkpoint): make delta snapshot_frequency configurable (#4516)
* feat(checkpoint): make delta snapshot_frequency configurable * fix(config): carry legacy checkpoint_delta_snapshot_frequency with warning Addresses review on #4516: the rename from the flat database.checkpoint_delta_snapshot_frequency key to nested database.checkpoint_delta.snapshot_frequency silently dropped the old value (pydantic extra="ignore"). Add a before-validator that maps the legacy key onto the nested one with a deprecation warning (nested key wins when both are set), plus a CHANGELOG breaking-change note covering the rename and the 1000 -> 10 default change. * fix(checkpoint): validate frozen snapshot frequency |
||
|
Vanzeren
|
e01173d8b2 |
bench(checkpoint): production-shaped full/delta benchmark with configurable snapshot frequency (#4467)
* feat(checkpoint): production-shaped full/delta benchmark with configurable snapshot frequency - Group benchmark scripts into per-family folders (checkpoint/, sandbox/) - Extract shared benchmark infrastructure into checkpoint_bench_common.py - Add checkpoint_delta_snapshot_frequency config (default 1000, process-frozen); freeze it in make_lead_agent and DeerFlowClient; key the state-schema adaptation cache by resolved frequency - New bench_production.py: per-case child processes run N ainvoke turns through the real lead-agent graph (scripted deterministic model, real AsyncSqliteSaver), then measure GET /state + POST /history through the real Gateway route stack in one event loop (httpx ASGITransport), cold/warm accessor-cache split, cross-mode digest gates - New summarize_production.py: delta/full ratios plus decision metrics (snapshot_write_spike, cache_effect_ms, checkpoint_write_share, auto-discovered history per-limit ratios) * fix(checkpoint): address production benchmark review |
||
|
Vanzeren
|
42baed8c8c |
feat(checkpoint): dual-mode checkpoint storage with LangGraph DeltaChannel (#4292)
* feat(checkpoint): dual-mode checkpoint storage with LangGraph DeltaChannel
Add a restart-required database.checkpoint_channel_mode ("full" default,
"delta") that stores the messages channel via LangGraph 1.2 DeltaChannel,
cutting checkpoint storage from O(n^2) to O(n) for append-only history.
Existing full checkpoints seed delta state transparently; no data migration.
- config: mode schema + freeze-on-first-use with
CheckpointModeReconfigurationError; mode marker persisted in checkpoint
metadata; unsafe delta->full downgrade rejected fail-closed with
CheckpointModeMismatchError (run-level error, failed state read)
- state: delta message state schema; CheckpointStateAccessor centralizes
materialized reads for all consumers (threads API, branches,
regeneration, compaction, state updates, memory, goal workers)
- runtime: raw writers (run durations, interrupted title, thread goal)
parent their checkpoints to the checkpoint they derive from, preserving
delta ancestry; rollback forks the pre-run lineage through a state
mutation graph with Overwrite restores; InMemorySaver delta-history
override delegates to the base walk (fixes dropped first write after
migration, also present upstream)
- tests: conformance suite over {memory, sqlite, postgres} covering
migration replay, stable message IDs, storage shape and writer
preservation; conftest fixture isolates the frozen mode between tests;
stale config fakes refreshed
- ci: backend unit tests gain a postgres service
* fix(checkpoint): close materialization gaps in goal flow, guard public factory
- Route goal-continuation message reads through CheckpointStateAccessor:
raw channel_values reads see the delta sentinel in delta mode, which
disabled goal continuation (stand_down=no_durable_end_of_turn) after
durable assistant turns. Raw tuples remain for tuple-only metadata
(checkpoint id, pending_writes).
- Reject checkpoint_channel_mode='delta' + checkpointer in
create_deerflow_agent at construction: factory-built persisted graphs
bypass mode-marker injection and the fail-closed gate, reproducing
silent mixed-mode state loss. Delta without persistence stays allowed.
- Import the postgres saver lazily (pytest.importorskip in the fixture)
so the documented default install collects the suite; add a CI job
running pytest --collect-only on uv sync --group dev without extras.
- Fix test_checkpointer fallback test to patch get_app_config at its
use site (provider module), making it deterministic when a local
config.yaml selects a persistent backend.
* fix(gateway): preserve extension-owned channels in state mutations, bump config version
- build_state_mutation_graph / build_checkpoint_state_mutation_accessor
accept an explicit state_schema; branch and POST /state now compile the
mutation graph from the thread's effective schema
(graph_state_schema on the assistant graph). The base-ThreadState
fallback silently discarded channels contributed by custom
AgentMiddleware.state_schema on branch (data loss) and returned a
false-success 200 on POST /state.
- POST /state validates values keys against the mutation graph's
channels and rejects unknown fields with 422 instead of ignoring
them; reducer detection covers extension channels
(BinaryOperatorAggregate or DeltaChannel) so Overwrite replace
semantics work for middleware reducers in both modes.
- Endpoint regression: custom AgentMiddleware.state_schema value
survives branch, updates through POST /state, and an unknown field
receives 422.
- config_version 26 -> 27 for the new database.checkpoint_channel_mode
(example, Helm chart values + README, support-bundle fixture), so
existing installs get the outdated-config warning and
make config-upgrade merges the field; covered by a test driving the
real example file and the real config-upgrade script.
* fix(gateway): resolve assistant schema via one boundary, copy branch reducer values with Overwrite
GET /threads/{id}/state now resolves the thread's assistant_id through a
single reusable boundary (thread metadata -> assistant_id -> effective
graph), so channels contributed by a custom AgentMiddleware.state_schema
are materialized instead of dropped by the default lead schema. POST
/state uses the same boundary instead of resolving the schema ad hoc.
Branch writes wrap every copied reducer channel in Overwrite (derived
from the effective mutation graph: BinaryOperatorAggregate + DeltaChannel),
not just messages, so already-aggregated values are never re-merged.
Regression tests use a real AgentMiddleware.state_schema with a
non-identity reducer in both full and delta modes: GET /state returns the
extension value, POST /state replaces it, branch preserves it
byte-for-byte; the unknown-field 422 is a separate assertion.
* refactor(checkpoint): collapse read-path round-trips and ship dual-mode parity tests
Address review round 4 on PR #4292:
- Push ahistory/history limit through Pregel into checkpointer.alist
(SQL LIMIT) instead of materializing all rows and breaking in Python
- Fold the read-side mode-compat gate onto the returned snapshot's
metadata; only writes keep the pre-write tuple fetch (fail-closed)
- Cache factory-built accessor graphs per (assistant_id, mode) with
factory-identity revalidation; state reads no longer build a lead
agent per request
- get_thread: one snapshot fetch + one raw pending_writes fetch on the
resolved checkpoint (post-checkpoint __error__ writes never surface
in snapshot.tasks; verified empirically)
- DeerFlowClient.get_thread: single checkpointer.list walk collects
pending_writes per checkpoint instead of N get_tuple calls
- InMemorySaver delta-history patch: stand-down when the upstream
override disappears, try/except guard, validated-version warning,
guard tests
- make_lead_agent mode precedence: first freeze is owned by app_config
(client-supplied configurable key ignored); once frozen, injected
key/app_config must match or fail closed
- Rollback: lock in non-message channel restoration via fork
inheritance with a dedicated reducer-channel test
- Add tests/test_threads_checkpoint_mode.py and
tests/test_gateway_checkpoint_mode.py referenced by AGENTS.md and
the PR validation section: lifecycle parity (memory + sqlite),
per-step blob-count storage guard, gateway endpoint parity
Counted-saver tests pin checkpoint round-trips for aget/ahistory so
these regressions cannot silently return.
* fix(checkpoint): precise mode-mismatch HTTP mapping, gate E2E, and accessor resilience
- threads router: map CheckpointModeMismatchError to 409 (with cause and
thread id) and CheckpointModeReconfigurationError to 503 across all state
endpoints instead of swallowing both into a generic 500
- gate coverage: seed a real delta checkpoint into AsyncSqliteSaver and
assert aget/aupdate/ahistory fail closed; assert 409 at the HTTP boundary
through the real route stack
- rollback: compile the restore mutation graph with the thread's effective
state schema per the build_state_mutation_graph contract
- inheritance contract locks: rollback and manual compaction preserve
middleware-contributed channels via checkpoint fork cloning
- services: revalidate the accessor-graph cache against app_config identity
so config.yaml hot-reloads never serve a stale compiled graph
- services: degrade full-mode state reads to raw checkpointer reads when the
agent factory is unavailable (delta gate still applies; delta mode has no
fallback)
- deps: override websockets==16.0 (langgraph-sdk 0.4.2's <16 pin silently
downgraded 16.0 -> 15.0.1; pin is not grounded in any API incompatibility)
and bump the langchain lower bound to what the lockfile actually resolves
* fix(checkpoint): include anchor checkpoint in degraded history walk + cover get_thread
- _RawCheckpointReadAccessor.ahistory: alist(before=...) is exclusive while
pregel's get_state_history treats config.checkpoint_id as the inclusive
start; fetch the anchor explicitly so both read paths paginate identically
- extend the degraded-path gateway test: GET /thread returns raw values, and
POST /history with before starts at the anchor checkpoint
* fix(gateway): preserve degraded checkpoint timestamps
* fix(gateway): harden degraded checkpoint access
* fix(gateway): resolve assistants for checkpoint reads
---------
Co-authored-by: Willem Jiang <willem.jiang@gmail.com>
|
||
|
Daoyuan Li
|
c143c0415b |
fix(config): Make the sync checkpointer honor the unified database config (#3994)
* Make the sync checkpointer honor the unified database config
The sync checkpointer factory (`get_checkpointer` and `checkpointer_context`)
read only the legacy `checkpointer:` config section and fell back to
`InMemorySaver` when it was absent — it never consulted `database:`. The async
`make_checkpointer` factory and both sync/async Store providers already resolve
the unified `database:` section (legacy `checkpointer:` takes precedence,
otherwise `database:` drives the backend), so the sync checkpointer was the
lone outlier.
Consequence: with `database: {backend: sqlite|postgres}` and no legacy
`checkpointer:` section, the sync checkpointer silently returned `InMemorySaver`
while the Store — same process, same config — correctly persisted to
sqlite/postgres. Embedded callers (`DeerFlowClient`) and the TUI hit this: e.g.
the TUI writes `threads_meta` rows to sqlite (thread appears in the Web UI) but
its checkpoints went to memory and were lost on exit. This also contradicts
backend/AGENTS.md ("the unified `database` section selects the Gateway's
LangGraph checkpointer, LangGraph Store, and DeerFlow SQL repositories").
Mirror the sync Store provider: add `_resolve_checkpointer_config` /
`_get_checkpointer_config` (legacy precedence, else translate `database:` into
a CheckpointerConfig) and route both the singleton and the context manager
through them. The Gateway is unaffected — it uses the async path.
Adds a TestCheckpointerDatabaseConfig suite mirroring the Store's database
tests (singleton + context-manager honor `database:`, legacy precedence,
explicit-memory, missing-config fallback). The two `uses_database_config`
tests fail (return InMemorySaver) before the fix and pass after.
* Handle database=None in sync checkpointer resolution
The unified-config change made `checkpointer_context` / `get_checkpointer`
consult `app_config.database` when no legacy `checkpointer:` section is set.
`AppConfig.database` is always a `DatabaseConfig` in production, but the
existing regression test for issue #1016
(`test_checkpointer_none_fix.py::test_sync_checkpointer_context_returns_in_memory_saver_when_not_configured`)
mocks the app config with `database` left unset, exercising a `database=None`
path that now raised `ValueError: Unknown database backend`.
Mirror the async `make_checkpointer` factory, which already tolerates
`database=None` (falls back to memory), by treating a `None` database as the
memory backend in `_resolve_checkpointer_config`. Update the sync test to set
`mock_config.database = None`, matching its async sibling in the same file.
* Address review: mirror None-guard in store resolver, add sqlite coverage
|
||
|
Tianye Song
|
15454b6fec |
feat(skills): deferred skill discovery via describe_skill tool (#3775)
Replace the full-metadata <available_skills> system-prompt block with a compact <skill_index> (names only) and an on-demand describe_skill tool when skills.deferred_discovery: true (default: false / backward compat). New modules: - skills/catalog.py — SkillCatalog (immutable, searchable; select: has no cap, keyword/prefix search caps at MAX_RESULTS=5) - skills/describe.py — build_describe_skill_tool(catalog) closure; build_skill_search_setup() wires SkillSearchSetup into both the LangGraph agent factory (agent.py) and DeerFlowClient (client.py) Changes: - Skill @dataclass(frozen=True); allowed_tools/required_secrets list→tuple - Skill First prompt line gated on skill_names (deferred vs legacy wording) - get_skills_prompt_section: short-circuit storage on deferred path; merge user_id (upstream) + skill_names (this PR) params - describe_skill tool parameter named "name" (matches prompt wording) - select: branch removes [:MAX_RESULTS] cap (exact request, not ranking) - AGENTS.md: document deferred_discovery config field + new modules Co-authored-by: Willem Jiang <willem.jiang@gmail.com> |
||
|
Huixin615
|
b476c7a18d |
fix(store): honor unified database configuration (#3904)
* fix(store): align store backend with database config * fix(store): preserve no-config memory fallback --------- Co-authored-by: Willem Jiang <willem.jiang@gmail.com> |
||
|
AochenShen99
|
0fb18e368c |
refactor(lead-agent): make build_middlewares public to drop the last cross-module private import (#3458)
`client.py` imported the private `_build_middlewares` from `agent.py` across a module boundary and called it as public API. Because the `_` name signals "module-private, no external callers", any future rename or signature change silently breaks the embedded `DeerFlowClient` path — and the test suite even monkeypatched `deerflow.client._build_middlewares`, baking the leak in. `DeerFlowClient` is a lead-agent variant that genuinely needs the lead agent's full middleware composition, so make the dependency honest: promote the helper to a documented public entry point `build_middlewares` and update every in-repo caller. Found during #3341 review; #3341 already removed one such leak (`_assemble_deferred` -> public `assemble_deferred_tools`) and left this one out of scope on purpose. - agent.py: rename def + both internal call sites; expand the docstring into a public-entry-point contract and document the previously-undocumented model_name / app_config / deferred_setup params - client.py: import + call site now use the public name (removes the last cross-module private import) - scripts/tool-error-degradation-detection.sh: update its import + call site - tests (5 files): update monkeypatch/patch targets and direct calls - docs (backend/CLAUDE.md, plan_mode_usage.md, middlewares.mdx): sync the live references that describe the symbol as current API Pure mechanical rename, no behavior change. Historical design docs (rfc, superpowers spec) intentionally keep the old name as point-in-time records. Closes #3431 |
||
|
Nan Gao
|
f725a963d5 |
fix(runtime): protect sync singleton init and reset (#3413)
* fix(runtime): protect sync singleton init/reset with threading.Lock * fix(runtime): serialize sync singleton init and reset * make format * test(runtime): assert store reset creates new singleton * Apply suggestions from code review Co-authored-by: Copilot Autofix powered by AI <175728472+Copilot@users.noreply.github.com> * fix(runtime): load config outside singleton locks * fix(runtime): share checkpointer config loading helper --------- Co-authored-by: GODDiao <diaoshengjia@gmail.com> Co-authored-by: Willem Jiang <willem.jiang@gmail.com> Co-authored-by: Copilot Autofix powered by AI <175728472+Copilot@users.noreply.github.com> |
||
|
Willem Jiang
|
031d6fbcbe |
fix(checkpointer): use AsyncConnectionPool for postgres to prevent stale connection errors (#3223) (#3226)
* fix(checkpointer): use AsyncConnectionPool for postgres to prevent stale connection errors (#3223) Replace AsyncPostgresSaver.from_conn_string() with an explicit AsyncConnectionPool that has check_connection enabled, so dead idle connections are detected and replaced on checkout instead of raising OperationalError. * Potential fix for pull request finding Co-authored-by: Copilot Autofix powered by AI <175728472+Copilot@users.noreply.github.com> * Fixed the unit test error and lint error * fix(checkpointer): add TCP keepalive to postgres connection pool (#3254) Enable TCP keepalive probes on the AsyncConnectionPool to prevent idle postgres connections from being dropped by the server or network middleware. Combined with the existing check_connection callback, this provides defense-in-depth against stale connection errors. Fixes #3254 * Changed the code as review suggestion --------- Co-authored-by: Copilot Autofix powered by AI <175728472+Copilot@users.noreply.github.com> |
||
|
AochenShen99
|
e344be8d94 |
feat(tests): add Blockbuster runtime gate for event-loop blocking IO (#3229)
* feat(tests): add Blockbuster runtime gate for event-loop blocking IO Adds a strict runtime gate that fails CI when sync blocking IO calls run on the asyncio event loop thread through DeerFlow business code. Components: - backend/tests/support/detectors/blocking_io_runtime.py — Blockbuster context scoped to `app.*` and `deerflow.*` so test infrastructure, pytest internals, and third-party libraries stay silent. - backend/tests/blocking_io/conftest.py — pytest_runtest_protocol hookwrapper that wraps every item (setup + call + teardown) with the strict context. Respects `@pytest.mark.allow_blocking_io` opt-out. - backend/tests/blocking_io/test_skills_load.py — regression anchor for the #1917 fix (asyncio.to_thread offload around LocalSkillStorage.load_skills). - backend/tests/blocking_io/test_sqlite_lifespan.py — regression anchor for the #1912 fix (asyncio.to_thread offload around ensure_sqlite_parent_dir). - backend/tests/blocking_io/test_gate_smoke.py — meta-test asserting the gate actually catches unoffloaded blocking IO and that the `@pytest.mark.allow_blocking_io` opt-out works. - backend/Makefile — `make test-blocking-io` target. - .github/workflows/backend-blocking-io-tests.yml — hard-fail PR gate on ubuntu-latest. Windows matrix deferred to follow-up. Dependencies: - blockbuster>=1.5.26,<1.6 added to dev group. Coverage boundary (called out in PR body): the gate only catches blocking IO on code paths the test suite actually exercises. Static AST inventory (separate, informational) is the complementary coverage tool. Three blind spot categories — untested paths, mocked-away paths, env-mismatched paths — are documented in the PR description. Findings surfaced while authoring this PR: - resolve_sqlite_conn_str in runtime/store/_sqlite_utils.py:19 does sync Path.resolve() -> os.path.abspath on the lifespan loop thread, ahead of the #1912 fix. Not addressed here; tracked as follow-up. Tests: 4 passed locally (`make test-blocking-io`). Lint/format: clean (`ruff check` and `ruff format --check`). * fix(tests): scope Blockbuster gate to blocking-io suite * fix(tests): harden Blockbuster runtime gate * test(blocking-io): add project rule extension point * test(blocking-io): address review cleanup |
||
|
KiteEater
|
7caf03e97c |
fix(packaging): add postgres extra for store/checkpointer supportFix postgres extra install guidance (#2584)
* Fix postgres extra install guidance * Fix postgres install message lint * Format postgres install messages * Fix postgres install guidance and config docs |
||
|
Willem Jiang
|
60754f0c50 | fix the unit tests error of agent provider | ||
|
rayhpeng
|
56d5fa3337 |
feat(persistence):Unified persistence layer with event store, feedback, and rebase cleanup (#2134)
* feat(persistence): add unified persistence layer with event store, token tracking, and feedback (#1930) * feat(persistence): add SQLAlchemy 2.0 async ORM scaffold Introduce a unified database configuration (DatabaseConfig) that controls both the LangGraph checkpointer and the DeerFlow application persistence layer from a single `database:` config section. New modules: - deerflow.config.database_config — Pydantic config with memory/sqlite/postgres backends - deerflow.persistence — async engine lifecycle, DeclarativeBase with to_dict mixin, Alembic skeleton - deerflow.runtime.runs.store — RunStore ABC + MemoryRunStore implementation Gateway integration initializes/tears down the persistence engine in the existing langgraph_runtime() context manager. Legacy checkpointer config is preserved for backward compatibility. Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> * feat(persistence): add RunEventStore ABC + MemoryRunEventStore Phase 2-A prerequisite for event storage: adds the unified run event stream interface (RunEventStore) with an in-memory implementation, RunEventsConfig, gateway integration, and comprehensive tests (27 cases). Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> * feat(persistence): add ORM models, repositories, DB/JSONL event stores, RunJournal, and API endpoints Phase 2-B: run persistence + event storage + token tracking. - ORM models: RunRow (with token fields), ThreadMetaRow, RunEventRow - RunRepository implements RunStore ABC via SQLAlchemy ORM - ThreadMetaRepository with owner access control - DbRunEventStore with trace content truncation and cursor pagination - JsonlRunEventStore with per-run files and seq recovery from disk - RunJournal (BaseCallbackHandler) captures LLM/tool/lifecycle events, accumulates token usage by caller type, buffers and flushes to store - RunManager now accepts optional RunStore for persistent backing - Worker creates RunJournal, writes human_message, injects callbacks - Gateway deps use factory functions (RunRepository when DB available) - New endpoints: messages, run messages, run events, token-usage - ThreadCreateRequest gains assistant_id field - 92 tests pass (33 new), zero regressions Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> * feat(persistence): add user feedback + follow-up run association Phase 2-C: feedback and follow-up tracking. - FeedbackRow ORM model (rating +1/-1, optional message_id, comment) - FeedbackRepository with CRUD, list_by_run/thread, aggregate stats - Feedback API endpoints: create, list, stats, delete - follow_up_to_run_id in RunCreateRequest (explicit or auto-detected from latest successful run on the thread) - Worker writes follow_up_to_run_id into human_message event metadata - Gateway deps: feedback_repo factory + getter - 17 new tests (14 FeedbackRepository + 3 follow-up association) - 109 total tests pass, zero regressions Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> * test+config: comprehensive Phase 2 test coverage + deprecate checkpointer config - config.example.yaml: deprecate standalone checkpointer section, activate unified database:sqlite as default (drives both checkpointer + app data) - New: test_thread_meta_repo.py (14 tests) — full ThreadMetaRepository coverage including check_access owner logic, list_by_owner pagination - Extended test_run_repository.py (+4 tests) — completion preserves fields, list ordering desc, limit, owner_none returns all - Extended test_run_journal.py (+8 tests) — on_chain_error, track_tokens=false, middleware no ai_message, unknown caller tokens, convenience fields, tool_error, non-summarization custom event - Extended test_run_event_store.py (+7 tests) — DB batch seq continuity, make_run_event_store factory (memory/db/jsonl/fallback/unknown) - Extended test_phase2b_integration.py (+4 tests) — create_or_reject persists, follow-up metadata, summarization in history, full DB-backed lifecycle - Fixed DB integration test to use proper fake objects (not MagicMock) for JSON-serializable metadata - 157 total Phase 2 tests pass, zero regressions Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> * config: move default sqlite_dir to .deer-flow/data Keep SQLite databases alongside other DeerFlow-managed data (threads, memory) under the .deer-flow/ directory instead of a top-level ./data folder. Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> * refactor(persistence): remove UTFJSON, use engine-level json_serializer + datetime.now() - Replace custom UTFJSON type with standard sqlalchemy.JSON in all ORM models. Add json_serializer=json.dumps(ensure_ascii=False) to all create_async_engine calls so non-ASCII text (Chinese etc.) is stored as-is in both SQLite and Postgres. - Change ORM datetime defaults from datetime.now(UTC) to datetime.now(), remove UTC imports. Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> * refactor(gateway): simplify deps.py with getter factory + inline repos - Replace 6 identical getter functions with _require() factory. - Inline 3 _make_*_repo() factories into langgraph_runtime(), call get_session_factory() once instead of 3 times. - Add thread_meta upsert in start_run (services.py). Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> * feat(docker): add UV_EXTRAS build arg for optional dependencies Support installing optional dependency groups (e.g. postgres) at Docker build time via UV_EXTRAS build arg: UV_EXTRAS=postgres docker compose build Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> * refactor(journal): fix flush, token tracking, and consolidate tests RunJournal fixes: - _flush_sync: retain events in buffer when no event loop instead of dropping them; worker's finally block flushes via async flush(). - on_llm_end: add tool_calls filter and caller=="lead_agent" guard for ai_message events; mark message IDs for dedup with record_llm_usage. - worker.py: persist completion data (tokens, message count) to RunStore in finally block. Model factory: - Auto-inject stream_usage=True for BaseChatOpenAI subclasses with custom api_base, so usage_metadata is populated in streaming responses. Test consolidation: - Delete test_phase2b_integration.py (redundant with existing tests). - Move DB-backed lifecycle test into test_run_journal.py. - Add tests for stream_usage injection in test_model_factory.py. - Clean up executor/task_tool dead journal references. Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> * feat(events): widen content type to str|dict in all store backends Allow event content to be a dict (for structured OpenAI-format messages) in addition to plain strings. Dict values are JSON-serialized for the DB backend and deserialized on read; memory and JSONL backends handle dicts natively. Trace truncation now serializes dicts to JSON before measuring. Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> * fix(events): use metadata flag instead of heuristic for dict content detection Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> * feat(converters): add LangChain-to-OpenAI message format converters Pure functions langchain_to_openai_message, langchain_to_openai_completion, langchain_messages_to_openai, and _infer_finish_reason for converting LangChain BaseMessage objects to OpenAI Chat Completions format, used by RunJournal for event storage. 15 unit tests added. Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> * fix(converters): handle empty list content as null, clean up test Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> * feat(events): human_message content uses OpenAI user message format Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com> * feat(events): ai_message uses OpenAI format, add ai_tool_call message event - ai_message content now uses {"role": "assistant", "content": "..."} format - New ai_tool_call message event emitted when lead_agent LLM responds with tool_calls - ai_tool_call uses langchain_to_openai_message converter for consistent format - Both events include finish_reason in metadata ("stop" or "tool_calls") Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> * feat(events): add tool_result message event with OpenAI tool message format Cache tool_call_id from on_tool_start keyed by run_id as fallback for on_tool_end, then emit a tool_result message event (role=tool, tool_call_id, content) after each successful tool completion. Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com> * feat(events): summary content uses OpenAI system message format Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> * feat(events): replace llm_start/llm_end with llm_request/llm_response in OpenAI format Add on_chat_model_start to capture structured prompt messages as llm_request events. Replace llm_end trace events with llm_response using OpenAI Chat Completions format. Track llm_call_index to pair request/response events. Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> * feat(events): add record_middleware method for middleware trace events Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> * test(events): add full run sequence integration test for OpenAI content format Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com> * feat(events): align message events with checkpoint format and add middleware tag injection - Message events (ai_message, ai_tool_call, tool_result, human_message) now use BaseMessage.model_dump() format, matching LangGraph checkpoint values.messages - on_tool_end extracts tool_call_id/name/status from ToolMessage objects - on_tool_error now emits tool_result message events with error status - record_middleware uses middleware:{tag} event_type and middleware category - Summarization custom events use middleware:summarize category - TitleMiddleware injects middleware:title tag via get_config() inheritance - SummarizationMiddleware model bound with middleware:summarize tag - Worker writes human_message using HumanMessage.model_dump() Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> * feat(threads): switch search endpoint to threads_meta table and sync title - POST /api/threads/search now queries threads_meta table directly, removing the two-phase Store + Checkpointer scan approach - Add ThreadMetaRepository.search() with metadata/status filters - Add ThreadMetaRepository.update_display_name() for title sync - Worker syncs checkpoint title to threads_meta.display_name on run completion - Map display_name to values.title in search response for API compatibility Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> * feat(threads): history endpoint reads messages from event store - POST /api/threads/{thread_id}/history now combines two data sources: checkpointer for checkpoint_id, metadata, title, thread_data; event store for messages (complete history, not truncated by summarization) - Strip internal LangGraph metadata keys from response - Remove full channel_values serialization in favor of selective fields Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> * fix: remove duplicate optional-dependencies header in pyproject.toml Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> * fix(middleware): pass tagged config to TitleMiddleware ainvoke call Without the config, the middleware:title tag was not injected, causing the LLM response to be recorded as a lead_agent ai_message in run_events. Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> * fix: resolve merge conflict in .env.example Keep both DATABASE_URL (from persistence-scaffold) and WECOM credentials (from main) after the merge. Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> * fix(persistence): address review feedback on PR #1851 - Fix naive datetime.now() → datetime.now(UTC) in all ORM models - Fix seq race condition in DbRunEventStore.put() with FOR UPDATE and UNIQUE(thread_id, seq) constraint - Encapsulate _store access in RunManager.update_run_completion() - Deduplicate _store.put() logic in RunManager via _persist_to_store() - Add update_run_completion to RunStore ABC + MemoryRunStore - Wire follow_up_to_run_id through the full create path - Add error recovery to RunJournal._flush_sync() lost-event scenario - Add migration note for search_threads breaking change - Fix test_checkpointer_none_fix mock to set database=None Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> * chore: update uv.lock Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> * fix(persistence): address 22 review comments from CodeQL, Copilot, and Code Quality Bug fixes: - Sanitize log params to prevent log injection (CodeQL) - Reset threads_meta.status to idle/error when run completes - Attach messages only to latest checkpoint in /history response - Write threads_meta on POST /threads so new threads appear in search Lint fixes: - Remove unused imports (journal.py, migrations/env.py, test_converters.py) - Convert lambda to named function (engine.py, Ruff E731) - Remove unused logger definitions in repos (Ruff F841) - Add logging to JSONL decode errors and empty except blocks - Separate assert side-effects in tests (CodeQL) - Remove unused local variables in tests (Ruff F841) - Fix max_trace_content truncation to use byte length, not char length Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> * style: apply ruff format to persistence and runtime files Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> * Potential fix for pull request finding 'Statement has no effect' Co-authored-by: Copilot Autofix powered by AI <223894421+github-code-quality[bot]@users.noreply.github.com> * refactor(runtime): introduce RunContext to reduce run_agent parameter bloat Extract checkpointer, store, event_store, run_events_config, thread_meta_repo, and follow_up_to_run_id into a frozen RunContext dataclass. Add get_run_context() in deps.py to build the base context from app.state singletons. start_run() uses dataclasses.replace() to enrich per-run fields before passing ctx to run_agent. Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> * refactor(gateway): move sanitize_log_param to app/gateway/utils.py Extract the log-injection sanitizer from routers/threads.py into a shared utils module and rename to sanitize_log_param (public API). Eliminates the reverse service → router import in services.py. Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> * perf: use SQL aggregation for feedback stats and thread token usage Replace Python-side counting in FeedbackRepository.aggregate_by_run with a single SELECT COUNT/SUM query. Add RunStore.aggregate_tokens_by_thread abstract method with SQL GROUP BY implementation in RunRepository and Python fallback in MemoryRunStore. Simplify the thread_token_usage endpoint to delegate to the new method, eliminating the limit=10000 truncation risk. Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> * docs: annotate DbRunEventStore.put() as low-frequency path Add docstring clarifying that put() opens a per-call transaction with FOR UPDATE and should only be used for infrequent writes (currently just the initial human_message event). High-throughput callers should use put_batch() instead. Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> * fix(threads): fall back to Store search when ThreadMetaRepository is unavailable When database.backend=memory (default) or no SQL session factory is configured, search_threads now queries the LangGraph Store instead of returning 503. Returns empty list if neither Store nor repo is available. Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> * refactor(persistence): introduce ThreadMetaStore ABC for backend-agnostic thread metadata Add ThreadMetaStore abstract base class with create/get/search/update/delete interface. ThreadMetaRepository (SQL) now inherits from it. New MemoryThreadMetaStore wraps LangGraph BaseStore for memory-mode deployments. deps.py now always provides a non-None thread_meta_repo, eliminating all `if thread_meta_repo is not None` guards in services.py, worker.py, and routers/threads.py. search_threads no longer needs a Store fallback branch. Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> * refactor(history): read messages from checkpointer instead of RunEventStore The /history endpoint now reads messages directly from the checkpointer's channel_values (the authoritative source) instead of querying RunEventStore.list_messages(). The RunEventStore API is preserved for other consumers. Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> * fix(persistence): address new Copilot review comments - feedback.py: validate thread_id/run_id before deleting feedback - jsonl.py: add path traversal protection with ID validation - run_repo.py: parse `before` to datetime for PostgreSQL compat - thread_meta_repo.py: fix pagination when metadata filter is active - database_config.py: use resolve_path for sqlite_dir consistency Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> * Implement skill self-evolution and skill_manage flow (#1874) * chore: ignore .worktrees directory * Add skill_manage self-evolution flow * Fix CI regressions for skill_manage * Address PR review feedback for skill evolution * fix(skill-evolution): preserve history on delete * fix(skill-evolution): tighten scanner fallbacks * docs: add skill_manage e2e evidence screenshot * fix(skill-manage): avoid blocking fs ops in session runtime --------- Co-authored-by: Willem Jiang <willem.jiang@gmail.com> * fix(config): resolve sqlite_dir relative to CWD, not Paths.base_dir resolve_path() resolves relative to Paths.base_dir (.deer-flow), which double-nested the path to .deer-flow/.deer-flow/data/app.db. Use Path.resolve() (CWD-relative) instead. Co-Authored-By: Claude Opus 4.6 (1M context) <noreply@anthropic.com> * Feature/feishu receive file (#1608) * feat(feishu): add channel file materialization hook for inbound messages - Introduce Channel.receive_file(msg, thread_id) as a base method for file materialization; default is no-op. - Implement FeishuChannel.receive_file to download files/images from Feishu messages, save to sandbox, and inject virtual paths into msg.text. - Update ChannelManager to call receive_file for any channel if msg.files is present, enabling downstream model access to user-uploaded files. - No impact on Slack/Telegram or other channels (they inherit the default no-op). * style(backend): format code with ruff for lint compliance - Auto-formatted packages/harness/deerflow/agents/factory.py and tests/test_create_deerflow_agent.py using `ruff format` - Ensured both files conform to project linting standards - Fixes CI lint check failures caused by code style issues * fix(feishu): handle file write operation asynchronously to prevent blocking * fix(feishu): rename GetMessageResourceRequest to _GetMessageResourceRequest and remove redundant code * test(feishu): add tests for receive_file method and placeholder replacement * fix(manager): remove unnecessary type casting for channel retrieval * fix(feishu): update logging messages to reflect resource handling instead of image * fix(feishu): sanitize filename by replacing invalid characters in file uploads * fix(feishu): improve filename sanitization and reorder image key handling in message processing * fix(feishu): add thread lock to prevent filename conflicts during file downloads * fix(test): correct bad merge in test_feishu_parser.py * chore: run ruff and apply formatting cleanup fix(feishu): preserve rich-text attachment order and improve fallback filename handling * fix(docker): restore gateway env vars and fix langgraph empty arg issue (#1915) Two production docker-compose.yaml bugs prevent `make up` from working: 1. Gateway missing DEER_FLOW_CONFIG_PATH and DEER_FLOW_EXTENSIONS_CONFIG_PATH environment overrides. Added in |
||
|
d 🔹
|
a664d2f5c4 |
fix(checkpointer): create parent directory before opening SQLite in sync provider (#2272)
* fix(checkpointer): create parent directory before opening SQLite in sync provider
The sync checkpointer factory (_sync_checkpointer_cm) opens a SQLite
connection without first ensuring the parent directory exists. The async
provider and both store providers already call ensure_sqlite_parent_dir(),
but this call was missing from the sync path.
When the deer-flow harness package is used from an external virtualenv
(where the .deer-flow directory is not pre-created), the missing parent
directory causes:
sqlite3.OperationalError: unable to open database file
Add the missing ensure_sqlite_parent_dir() call in the sync SQLite
branch, consistent with the async provider, and add a regression test.
Closes #2259
* style: fix ruff format + add call-order assertion for ensure_parent_dir
- Fix formatting in test_checkpointer.py (ruff format)
- Add test_sqlite_ensure_parent_dir_before_connect to verify
ensure_sqlite_parent_dir is called before from_conn_string
(addresses Copilot review suggestion)
---------
Co-authored-by: voidborne-d <voidborne-d@users.noreply.github.com>
|
||
|
Markus Corazzione
|
c4da0e8ca9 |
Move async SQLite mkdir off the event loop (#1921)
Co-authored-by: DanielWalnut <45447813+hetaoBackend@users.noreply.github.com> |
||
|
haoliangxu
|
3af709097e |
fix: normalize structured LLM content in serialization and memory updater (#1215)
* fix: normalize ToolMessage structured content in serialization
When models return ToolMessage content as a list of content blocks
(e.g. [{"type": "text", "text": "..."}]), the UI previously displayed
the raw Python repr string instead of the extracted text.
Replace str(msg.content) with the existing _extract_text() helper in
both _serialize_message() and stream() to properly normalize
list-of-blocks content to plain text.
Fixes #1149
Also fixes the same root cause as #1188 (characters displayed one per
line when tool response content is returned as structured blocks).
Added 11 regression tests covering string, list-of-blocks, mixed,
empty, and fallback content types.
* fix(memory): extract text from structured LLM responses in memory updater
When LLMs return response content as list of content blocks
(e.g. [{"type": "text", "text": "..."}]) instead of plain strings,
str() produces Python repr which breaks JSON parsing in the memory
updater. This caused memory updates to silently fail.
Changes:
- Add _extract_text() helper in updater.py for safe content normalization
- Use _extract_text() instead of str(response.content) in update_memory()
- Fix format_conversation_for_update() to handle plain strings in list content
- Fix subagent executor fallback path to extract text from list content
- Replace print() with structured logging (logger.info/warning/error)
- Add 13 regression tests covering _extract_text, format_conversation,
and update_memory with structured LLM responses
* fix: address Copilot review - defensive text extraction + logger.exception
- client.py _extract_text: use block.get('text') + isinstance check (prevent KeyError/TypeError)
- prompt.py format_conversation_for_update: same defensive check for dict text blocks
- executor.py: type-safe text extraction in both code paths, fallback to placeholder instead of str(raw_content)
- updater.py: use logger.exception() instead of logger.error() for traceback preservation
* Apply suggestions from code review
Co-authored-by: Copilot <175728472+Copilot@users.noreply.github.com>
* fix: preserve chunked structured content without spurious newlines
* fix: restore backend unit test compatibility
---------
Co-authored-by: Exploreunive <Exploreunive@users.noreply.github.com>
Co-authored-by: Willem Jiang <willem.jiang@gmail.com>
Co-authored-by: Copilot <175728472+Copilot@users.noreply.github.com>
|
||
|
DanielWalnut
|
76803b826f |
refactor: split backend into harness (deerflow.*) and app (app.*) (#1131)
* refactor: extract shared utils to break harness→app cross-layer imports Move _validate_skill_frontmatter to src/skills/validation.py and CONVERTIBLE_EXTENSIONS + convert_file_to_markdown to src/utils/file_conversion.py. This eliminates the two reverse dependencies from client.py (harness layer) into gateway/routers/ (app layer), preparing for the harness/app package split. Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com> * refactor: split backend/src into harness (deerflow.*) and app (app.*) Physically split the monolithic backend/src/ package into two layers: - **Harness** (`packages/harness/deerflow/`): publishable agent framework package with import prefix `deerflow.*`. Contains agents, sandbox, tools, models, MCP, skills, config, and all core infrastructure. - **App** (`app/`): unpublished application code with import prefix `app.*`. Contains gateway (FastAPI REST API) and channels (IM integrations). Key changes: - Move 13 harness modules to packages/harness/deerflow/ via git mv - Move gateway + channels to app/ via git mv - Rename all imports: src.* → deerflow.* (harness) / app.* (app layer) - Set up uv workspace with deerflow-harness as workspace member - Update langgraph.json, config.example.yaml, all scripts, Docker files - Add build-system (hatchling) to harness pyproject.toml - Add PYTHONPATH=. to gateway startup commands for app.* resolution - Update ruff.toml with known-first-party for import sorting - Update all documentation to reflect new directory structure Boundary rule enforced: harness code never imports from app. All 429 tests pass. Lint clean. Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com> * chore: add harness→app boundary check test and update docs Add test_harness_boundary.py that scans all Python files in packages/harness/deerflow/ and fails if any `from app.*` or `import app.*` statement is found. This enforces the architectural rule that the harness layer never depends on the app layer. Update CLAUDE.md to document the harness/app split architecture, import conventions, and the boundary enforcement test. Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com> * feat: add config versioning with auto-upgrade on startup When config.example.yaml schema changes, developers' local config.yaml files can silently become outdated. This adds a config_version field and auto-upgrade mechanism so breaking changes (like src.* → deerflow.* renames) are applied automatically before services start. - Add config_version: 1 to config.example.yaml - Add startup version check warning in AppConfig.from_file() - Add scripts/config-upgrade.sh with migration registry for value replacements - Add `make config-upgrade` target - Auto-run config-upgrade in serve.sh and start-daemon.sh before starting services - Add config error hints in service failure messages Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com> * fix comments * fix: update src.* import in test_sandbox_tools_security to deerflow.* Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com> * fix: handle empty config and search parent dirs for config.example.yaml Address Copilot review comments on PR #1131: - Guard against yaml.safe_load() returning None for empty config files - Search parent directories for config.example.yaml instead of only looking next to config.yaml, fixing detection in common setups Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com> * fix: correct skills root path depth and config_version type coercion - loader.py: fix get_skills_root_path() to use 5 parent levels (was 3) after harness split, file lives at packages/harness/deerflow/skills/ so parent×3 resolved to backend/packages/harness/ instead of backend/ - app_config.py: coerce config_version to int() before comparison in _check_config_version() to prevent TypeError when YAML stores value as string (e.g. config_version: "1") - tests: add regression tests for both fixes Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com> * fix: update test imports from src.* to deerflow.*/app.* after harness refactor Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com> --------- Co-authored-by: Claude Opus 4.6 <noreply@anthropic.com> |
||
|
lailoo
|
959b4f2b09 |
fix(checkpointer): return InMemorySaver instead of None when not configured (#1016) (#1019)
* fix(checkpointer): return InMemorySaver instead of None when not configured (#1016) * fix(checkpointer): also fix get_checkpointer() to return InMemorySaver Make all three checkpointer functions consistent: - make_checkpointer() (async) → InMemorySaver - checkpointer_context() (sync) → InMemorySaver - get_checkpointer() (sync singleton) → InMemorySaver This ensures DeerFlowClient always has a valid checkpointer. * fix: address CI failure and Copilot review feedback - Fix import order in test_checkpointer_none_fix.py (I001 ruff error) - Fix type annotation: _checkpointer should be Checkpointer | None - Update docstring: change "None if not configured" to "InMemorySaver if not configured" - Ensure app config is loaded before checking checkpointer config to prevent incorrect InMemorySaver fallback --------- Co-authored-by: Willem Jiang <willem.jiang@gmail.com> |
||
|
JeffJiang
|
d664ae5a4b |
Support langgraph checkpointer (#1005)
* Add checkpointer configuration to config.example.yaml - Introduced a new section for checkpointer configuration to enable state persistence for the embedded DeerFlowClient. - Documented supported types: memory, sqlite, and postgres, along with examples for each. - Clarified that the LangGraph Server manages its own state persistence separately. * refactor(checkpointer): streamline checkpointer initialization and logging * fix(uv.lock): update revision and add new wheel URLs for brotlicffi package * feat: add langchain-anthropic dependency and update related configurations * Fix checkpointer lifecycle, docstring, and path resolution bugs from PR #1005 review (#4) * Initial plan * Address all review suggestions from PR #1005 Co-authored-by: foreleven <4785594+foreleven@users.noreply.github.com> * Fix resolve_path to always return real Path; move SQLite special-string handling to callers Co-authored-by: foreleven <4785594+foreleven@users.noreply.github.com> --------- Co-authored-by: copilot-swe-agent[bot] <198982749+Copilot@users.noreply.github.com> Co-authored-by: foreleven <4785594+foreleven@users.noreply.github.com> --------- Co-authored-by: Copilot <198982749+Copilot@users.noreply.github.com> Co-authored-by: foreleven <4785594+foreleven@users.noreply.github.com> |