cmd_normalize warned on relative keys but still ran them through
canonical() (os.path.abspath), which resolves them against the CWD and
rewrote e.g. "-Users-x-github/abc.jsonl" to "/cwd/-Users-x-github/abc.jsonl",
counted it as re-keyed, and persisted the corruption on a non-dry-run write.
Preserve relative keys untouched (ckey = key), skip the re-key count for
them, and only canonicalize absolute keys. normalize's dedup/canonicalize
purpose applies to absolute keys only; for relative keys it is now a safe
no-op. Collision merge logic is unchanged.
AI-Agent: Claude Code
AI-Session-IDs: session_01PPCNXmXUvemmyvWxrJ3D5E
cmd_delta keyed every manifest source through canonical() (os.path.abspath),
which resolves relative keys (e.g. "-Users-x-github/abc.jsonl" under
~/.claude/projects/) against the CWD. Real vaults store most keys relatively,
so every already-ingested file was misreported as NEW (446 vs 384 known on the
live vault).
Add a basename-indexed suffix fallback: when a scanned absolute path has no
direct canonical match, look it up by basename and confirm the relative key is
a path suffix (O(1) avg, no O(n^2) scan). Absolute keys keep their exact prior
behavior. cmd_normalize is unchanged but now warns on relative keys, which it
would otherwise rewrite to CWD-based garbage.
AI-Agent: Claude Code
AI-Session-IDs: session_01PPCNXmXUvemmyvWxrJ3D5E
Source keys could be stored as both ~-relative and absolute paths, so the
same file got tracked twice and re-ingested in append mode (5 such collisions
found in a real 137-source vault). Also no supported way to exclude projects
from history ingest, and manifest updates were ad-hoc inline Python.
- scripts/manifest.py: stdlib helper. `normalize` rewrites source keys to
canonical absolute paths and merges collisions (keeps newest ingested_at,
unions pages lists); `delta` lists new/modified sources honoring
WIKI_SKIP_PROJECTS + --skip.
- llm-wiki/SKILL.md: canonical-source-key rule + provenance recording note;
WIKI_SKIP_PROJECTS in env table.
- wiki-status/SKILL.md: schema example now uses absolute paths consistently
(was mixing ~ and absolute); canonical-key callout.
- claude-history-ingest/SKILL.md: Project Scoping step, canonical-path compare
note (with helper usage), conversation sampling heuristic, desktop-session
pre-check, hot.md frontmatter-timestamp reminder.
- .env.example: WIKI_SKIP_PROJECTS.
Closes#86, #87, #88
Roy